CK937600

Overview
NameCK937600
Unique NameCK937600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937600 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.089e-22
Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 3 
Query:    6 TCLDPIQVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTGKPIPKWVNRLAKIGSVCNCVLPEALKISAV 227
            T +     R +ME+ S  Y+GDTYHLI KNCNHF +++C +LTGKPIP W+NRLA++GS CNC+LPE+++++AV
Sbjct:   95 TSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAV 168
The following BLAST results are available for this feature:
BLAST of CK937600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U326_ARATH3.089e-2256.76UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004778_F03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937600 ID=CK937600; Name=CK937600; organism=Citrus sinensis; type=EST; length=744bp
GGGCCACATGCTTGGACCCTATTCAGGTTAGAGAGTTCATGGAGAGACAA
TCTGCACACTATAATGGTGATACATATCACTTGATTGTTAAGAATTGCAA
TCATTTCTGCAAGGACATTTGTTATAAGCTAACCGGGAAGCCAATTCCAA
AATGGGTGAATCGACTGGCAAAAATAGGTTCAGTCTGCAACTGCGTGCTT
CCTGAAGCCCTGAAGATTTCCGCTGTGCGGCATGATCCTAATTACCAGCC
GATTGATAGTGACAAAAGGAGGCTAAGAAGTGCATTTAGTTGCTTGTCAT
CAATCTCAATGCGGCAAAAACAGTTGTCTACGTCCTCCCTGCTTCTACAA
TCACCCTTGAAAGGCTGCCTACCATCATGGGAATTGAGAAGGTCAAACAA
TGGTTCATTGAAGGAAAGGTGAGACAACTGCTTAGAGGATTTCTTTAGCA
TCGACGCAGTCTTTTAATGTGGAGACTGAGCTGCATAAGCTTGATGAAGA
GATTTTCTTTAAATCTGTTCTTTACGTATGCCAAAATGTGATGCCATCGC
TCGAGTATTCTTGGTTTAGCAAGTTTGAATGATGCTTGCCATCTATGCTT
CTGCTGTCAGAAACTATTGTGAATTAAGGTAGATCAACTAATTGCCATCT
TGAAGATATGTTCCTATGACTCAAATATTCTGATATCATTTGTTCTTAGT
AAATAGATTTGTCTCAAAAAAAAAAAAANAAAAAAAAAAAAAAA
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