CK937599

Overview
NameCK937599
Unique NameCK937599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK937599_ssr39 microsatellite CK937599_ssr39:39..54. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.876e-52
Identity = 104/196 (53.06%), Postives = 132/196 (67.35%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            +L+TG K+P +GLGTW+S+PG V  AV  A+  GYRHIDCA IYGNE EIG  LK+    G  V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  RA+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTICYDSTHYKETWKALEALVAKGLVRALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQ 201          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.159e-51
Identity = 103/196 (52.55%), Postives = 133/196 (67.86%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            +L+TG K+P +GLGTW+SDPG V  A+  A+  GYRHIDCA IYGNE EIG  LK+    G +V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TW+A+EAL   G  RA+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:    7 LLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDSPF-PKNADGTIRYDSTHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQ 201          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.977e-51
Identity = 103/204 (50.49%), Postives = 136/204 (66.67%), Query Frame = 1
Query:   73 MANEIRQFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            MA  +    L TG K+P +GLGTW+S PG V +AV  A+  GYRHIDCA +YGNE E+G  +K+    D  +KRE++++TSKLWN  H P+DV  AL +TL++LQ+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L + G A+AIG+SNF+ +++ D+L +A V PAV QVECHP   Q +L   C+
Sbjct:    1 MATSVEYETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVF-PQNPDGSVQYDLTDYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQVECHPYLAQNELIACCR 203          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 4.405e-51
Identity = 101/195 (51.79%), Postives = 131/195 (67.18%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFC 660
            +L+TG K+P +GLGTW+S+PG V  A+  A+ AGYRHIDCA +YGNE EIG  LK+    G  V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+E L   G  +A+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHC 200          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 4.405e-51
Identity = 103/196 (52.55%), Postives = 132/196 (67.35%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            +L+TG K+P +GLGTW+S+PG V  AV  A+  GYRHIDCA IYGNE EIG  LK+    G  V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  +A+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQ 201          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.753e-51
Identity = 101/196 (51.53%), Postives = 132/196 (67.35%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA +YGNE EIG  LK+    G  V RE+L++TSKLWN  H PEDV  A+ +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  +A+G+SNFS++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTVKYDSTHYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQ 201          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.514e-51
Identity = 102/203 (50.25%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   73 MANEIRQFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFC 660
            MA  +    L TG KIP +GLGTW+S PG V +AV  A+  GYRHIDCA +YGNE E+G  +K+    D  + RE++++TSKLWN  H P+DV  AL +TL+DLQ+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L   G  +AIG+SNF+ +++ D++ +A V PAV QVECHP   Q +L  +C
Sbjct:    1 MATAVEYETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIF-PQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTKAIGLSNFNKRQIDDIISIATVKPAVLQVECHPYLAQNELIAYC 202          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 9.814e-51
Identity = 103/196 (52.55%), Postives = 131/196 (66.84%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDG-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA IYGNE EIG  L +    G  V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  RA+G+SNFS++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQ 201          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.855e-50
Identity = 102/195 (52.31%), Postives = 130/195 (66.67%), Query Frame = 1
Query:  100 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVXPAVNQVECHPSWQQQKLREFCK 663
            L  G KIP +GLGTW+S+PG V  AV  A+  GYRH+DCA  Y NE EIG   ++    + V+KREDL++TSKLWN  H PEDV  AL +TL DL++DYLDLYLMHWP   ++G   F P+N       D  D   TWKAME L + G A+AIG+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+
Sbjct:   10 LYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLF-PKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQVECHPYLAQNELIAHCQ 203          
BLAST of CK937599 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.673e-48
Identity = 102/196 (52.04%), Postives = 128/196 (65.31%), Query Frame = 1
Query:   97 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDGVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACV--XPAVNQVECHPSWQQQKLREFC 660
            VL TGAK+P +GLGTW+S PG V  AV  AI  GYRHIDCA +Y NE E+GL L+   ++ VVKREDL+I SKLW  YH+ + V  A  +TL DL++DYLDLYL+HWP   K G   F P + D   IPS      TW AME L D G  +AIGVSNF+  ++  +L    +   PAVNQ+ECHP   Q+KL ++C
Sbjct:    5 VLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK-DFFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYC 199          
The following BLAST results are available for this feature:
BLAST of CK937599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1A1_PONAB8.876e-5253.06Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_BOVIN1.159e-5152.55Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_XENLA1.977e-5150.49Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_MOUSE4.405e-5151.79Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_HUMAN4.405e-5152.55Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
AK1A1_RAT5.753e-5151.53Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_XENTR7.514e-5150.25Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_PIG9.814e-5152.55Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_CHICK2.855e-5052.31Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
ALDR_BOVIN2.673e-4852.04Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004778_F02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937599 ID=CK937599; Name=CK937599; organism=Citrus sinensis; type=EST; length=663bp
GGGGGTCCACTCATTCGCTCACGCTTTTTGGCTCATTGCTCTCTCTCTCT
CTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACAGTTCGTGC
TGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAGTCT
GATCCTGGTGTCGTCGGCAATGCTGTTGCTGCCGCCATCAAGGCTGGATA
CCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTGGTT
TGGTGCTGAAGAAGTTTTTTGAAGATGGTGTTGTCAAGCGTGAGGATTTG
TGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGTACC
AGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTGATC
TATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGCTTC
AAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGCAAT
GGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCAATT
TTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCATGTGTNNNTCCT
GCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCTTCG
TGAATTCTGTAAA
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