EY665883

Overview
NameEY665883
Unique NameEY665883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.655e-74
Identity = 146/208 (70.19%), Postives = 161/208 (77.40%), Query Frame = 1
Query:   64 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGSL*EGWI*APQGSGSPPIMPFPQ*PTKVSQSSPYCLTQK--VLPPFQG*NS*LAQLCFASTHEKDIIPGKNFGI 681
            MTKQ   WSPYDNNGGTCVA+AGADYCV AADTRMSTGY+IL+RDYSKIIKLADKCVMASSGFQADV+ALQK+LA+RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN LGGLD+EGK CV+TYDAVGS  E    + QGSGS  IMPF     ++   SP  L  +  V P  +     L + CFAS  E+DI  G    I
Sbjct:    1 MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSY-ERVGYSSQGSGSTLIMPFLD--NQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEI 205          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 9.342e-69
Identity = 139/208 (66.83%), Postives = 155/208 (74.52%), Query Frame = 1
Query:   64 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGSL*EGWI*APQGSGSPPIMPFPQ*PTKVSQSSPYCLTQK--VLPPFQG*NS*LAQLCFASTHEKDIIPGKNFGI 681
            MTKQH  WSPYDNNGGTCVAIAG+DYCV AADTRMSTGYSILSRDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM QLLSNTLY+KRFFPYY+FN LGGLD EGK CV+TYDAVGS  E      QGSGS  IMPF     ++   SP  L ++    P  +     L +  FAS  E+DI  G    I
Sbjct:    1 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSY-ERVGYGAQGSGSTLIMPFLD--NQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEI 205          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.352e-59
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 1
Query:   94 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGSL*EGWI*APQGSGSPPIMPFPQ*PTKVSQSSPYCLTQK--VLPPFQG*NS*LAQLCFASTHEKDIIPGKNFGI 681
            Y+NNGGTCVAIAGADYCV AADTR+S GY+IL+RD+SKI +LADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FN LGGLD+EGK CV+TYDAVGS  E    + QG+GS  IMP      ++   SP  L  +  V P  +     L +  FAS  E+DI  G    I
Sbjct:    9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSY-ERTGYSAQGTGSALIMPVLD--NQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEI 203          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_DICDI (Proteasome subunit beta type-1 OS=Dictyostelium discoideum GN=psmB1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.481e-37
Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = 1
Query:   76 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGSL*EGWI*APQGSGSPPIMP 525
            H  +  Y +NGGT +A+AG DYCV A DTRMS G Y I +R Y+KI +L  KCV+A+SG QAD  ALQK L +    ++ +H K MS PA+ Q LSNTLYYKRFFPYY+FN + G+D +G+  ++TYDAVGS  E    + QGSG+  ++P
Sbjct:   20 HGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAVGSH-ERVKYSSQGSGNQLVIP 169          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
Query:   85 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGS 468
            +SPY  NGGT +AIAG D+ + A+DTR+S G+SI +RD  K  KL DK V+  SGF  D   L K++ AR  +Y+H +NK M+  A+  +LS  LY +RFFPYY +N +GGLD EGK  VY++D VGS
Sbjct:   29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 156          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
Query:   85 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGS 468
            +SPY  NGGT +AIAG D+ + A+DTR+S G+SI +RD  K  KL DK V+  SGF  D   L K++ AR  +Y+H +NK M+  A+  +LS  LY +RFFPYY +N +GGLD EGK  VY++D VGS
Sbjct:   30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 157          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1
Query:   85 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGS 468
            +SPY  NGGT +AIAG D+ + A+DTR+S G+SI +RD  K  KL DK V+  SGF  D   L K++ AR  +Y+H +NK M+  A+  +LS  LY +RFFPYY +N +GGLD EGK  VY++D VGS
Sbjct:   30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 157          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1_DROME (Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.558e-31
Identity = 65/131 (49.62%), Postives = 91/131 (69.47%), Query Frame = 1
Query:   73 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVG 465
            +HP +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR  SK+ KL+ + V+ S+G  AD  +L   +  R   Y+H H + M+  A+ Q+LS  +Y +RFFPYY  N L G+DNEGK  VY+YD +G
Sbjct:   18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIG 148          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.558e-31
Identity = 65/128 (50.78%), Postives = 87/128 (67.97%), Query Frame = 1
Query:   85 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGS 468
            +SPY  NGGT +A+AG D+ + A+DTR+S GYSI SRD  K  KL D  V+  SGF  D   L K++ AR  +Y+H +NK M+  A+  +LS  LY +RFFPYY +N +GGLD EG+  VY++D VGS
Sbjct:   26 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGS 153          
BLAST of EY665883 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.558e-31
Identity = 65/128 (50.78%), Postives = 87/128 (67.97%), Query Frame = 1
Query:   85 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNALGGLDNEGKACVYTYDAVGS 468
            +SPY  NGGT +A+AG D+ + A+DTR+S GYSI SRD  K  KL D  V+  SGF  D   L K++ AR  +Y+H +NK M+  A+  +LS  LY +RFFPYY +N +GGLD EG+  VY++D VGS
Sbjct:   27 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGS 154          
The following BLAST results are available for this feature:
BLAST of EY665883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
PSB1_PETHY5.655e-7470.19Proteasome subunit beta type-1 OS=Petunia hybrida ... [more]
PSB1_ARATH9.342e-6966.83Proteasome subunit beta type-1 OS=Arabidopsis thal... [more]
PSB1_ORYSJ1.352e-5962.12Proteasome subunit beta type-1 OS=Oryza sativa sub... [more]
PSB1_DICDI2.481e-3752.98Proteasome subunit beta type-1 OS=Dictyostelium di... [more]
PSB1_MOUSE5.354e-3251.56Proteasome subunit beta type-1 OS=Mus musculus GN=... [more]
PSB1_HUMAN5.354e-3251.56Proteasome subunit beta type-1 OS=Homo sapiens GN=... [more]
PSB1_BOVIN5.354e-3251.56Proteasome subunit beta type-1 OS=Bos taurus GN=PS... [more]
PSB1_DROME1.558e-3149.62Proteasome subunit beta type-1 OS=Drosophila melan... [more]
PSB1B_CARAU1.558e-3150.78Proteasome subunit beta type-1-B OS=Carassius aura... [more]
PSB1A_CARAU1.558e-3150.78Proteasome subunit beta type-1-A OS=Carassius aura... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665883 ID=EY665883; Name=EY665883; organism=Citrus sinensis; type=EST; length=849bp
AACACTGGAAACGACCCCATTCATATTGTCCAAATTTCAAACCCTAATTA
CTGACAATTCATCATGACGAAGCAGCATCCCGCATGGTCTCCATACGACA
ATAATGGAGGAACTTGTGTTGCGATTGCCGGAGCTGATTACTGTGTAACC
GCTGCCGACACTCGAATGTCAACCGGTTACAGTATCCTCTCCCGCGATTA
CTCCAAAATCATTAAACTGGCAGACAAATGTGTTATGGCCTCTTCTGGTT
TTCAAGCTGATGTCAAAGCCTTACAAAAACTCTTGGCAGCAAGGCATTTG
ATCTATCAGCATCAGCACAACAAGCAAATGAGCTGCCCTGCAATGGGCCA
ACTACTCTCCAACACCCTGTACTACAAACGTTTCTTTCCTTACTATTCGT
TTAATGCCTTGGGTGGGCTTGACAATGAAGGGAAGGCGTGTGTCTACACA
TATGATGCTGTTGGTTCCCTATGAGAGGGTTGGATATAAGCTCCCCAGGG
TTCTGGTTCCCCGCCCATCATGCCCTTTCCTCAATAACCCACTAAAGTCT
CCCAGTCCTCTCCCTATTGCCTGACCCAGAAGGTGTTACCCCCCTTTCAA
GGCTGAAACAGCTGATTGGCTCAACTTTGTTTCGCATCCACACATGAGAA
GGACATAATCCCGGGAAAAAACTTTGGAATCTGTTGTCCCAAACCCCCAT
GGCCATTCTTCCCCCAACACTTGCAATTGACGGAGGCAACACTCCCTCTT
GACACTCCCCCCCACCCGCCCCCCTCCAGAAGGGTGGGCGCGTCCATTGC
CACACCTTCCAACGGTGTTTGGGCGACTGCCTCGGGCAGATCTTCAATC
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