CK937484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: U161_ARATH (UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.122e-37 Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 1 Query: 19 MAVSLNCHNKPLSTSLNFQNPNFSSSKYHRK-NQNHISAFRLPAKTKTH-RIVTVRGLGTDSDPNTPQEGLRSPSLSLLSTEKKGKNSIF*LLDSEICWVLDF*LDDKEVNSLGVRAALSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPPRWFDE 570 MAV ++ H ++ +++ N + K HR+ N++ + LP TK R ++ + + DP +PQ+G +E+ S+GV+AAL+ML FYKREISP++PRSCRYVPTCSEYSM+AYKKYGV+KGTVLT WRLCRCNPLGGSGFDPPRWF E Sbjct: 1 MAVVISIHRPYVTLTIS---KNRNPLKPHRQFNESCLRFDHLPRNTKNQLRCLSAKSTPSKPDPASPQDG-------------------------------------EELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y1017_SALRD (UPF0161 protein SRU_1017 OS=Salinibacter ruber (strain DSM 13855) GN=SRU_1017 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 38/71 (53.52%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 367 LSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPPRWFDEESP 579 + ++ Y+ +SP + R+CR+ PTCS Y++QA+++YG +KG VLT RL RC+P GG G+DPPRWFDEE P Sbjct: 17 IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGYDPPRWFDEEHP 87
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y4526_CAUSK (UPF0161 protein Caul_4526 OS=Caulobacter sp. (strain K31) GN=Caul_4526 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.697e-16 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 376 LSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPP 555 L YK +SP + R CRY+PTCSEY+ QA K +G +KG+ L R+CRCNPLGGSG+DPP Sbjct: 12 LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y2412_THEPX (UPF0161 protein Teth514_2412 OS=Thermoanaerobacter sp. (strain X514) GN=Teth514_2412 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 373 MLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 ++ Y+R ISP+ PRSCR+ PTCS+YS++A KYG++KG +++ WR+ RCNP G+DP Sbjct: 8 LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y2293_THEP3 (UPF0161 protein Teth39_2293 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=Teth39_2293 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 373 MLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 ++ Y+R ISP+ PRSCR+ PTCS+YS++A KYG++KG +++ WR+ RCNP G+DP Sbjct: 8 LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y1913_GLOVI (UPF0161 protein gsl1913 OS=Gloeobacter violaceus GN=gsl1913 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 358 RAALSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 RAA + FY+R +SPL P +CRYVPTCSEY+ QA +++GV G L RLCRC+PL G+DP Sbjct: 6 RAATGAIRFYQRFVSPLTPPTCRYVPTCSEYTRQAIERFGVAAGIWLGTKRLCRCHPLHPGGYDP 70
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y2420_CYTH3 (UPF0161 protein CHU_2420 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=CHU_2420 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 376 LSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 + Y+ ISPL+P +CRY PTCSEY +QA +KYG +KG L R+C CNP GGSG+DP Sbjct: 19 VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPWGGSGYDP 77
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y2800_THETN (UPF0161 protein TTE2800 OS=Thermoanaerobacter tengcongensis GN=TTE2800 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 29/60 (48.33%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 373 MLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 ++ Y++ ISP+ PR+CR+ PTCS+YS++A KYG++KG +++ WR+ RCNP G+DP Sbjct: 8 LIRLYQKYISPMKPRTCRFYPTCSQYSIEAISKYGLLKGGLMSIWRILRCNPFNPGGYDP 67
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y3056_PARD8 (UPF0161 protein BDI_3056 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=BDI_3056 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 382 FYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 FYK IS + P SCRY PTCSEY++QA KKYG VKG L R+ RC+P GGSG+DP Sbjct: 15 FYKYCISLMTPASCRYTPTCSEYAVQALKKYGPVKGLYLAVKRILRCHPWGGSGYDP 71
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y317_NEIMF (UPF0161 protein NMC0317 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=NMC0317 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 340 VNSLGVRAALSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 +N L + L ++ FY+ ISPL+P CRY PTCS+Y+++A KKYG KG L R+ RC+PLGG G DP Sbjct: 1 MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPLGGHGHDP 71 The following BLAST results are available for this feature:
BLAST of CK937484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937484 ID=CK937484; Name=CK937484; organism=Citrus sinensis; type=EST; length=665bpback to top |