FC921778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921778 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.516e-14 Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 2 Query: 2 YWAHPIAWTLYGLVASQFGDMDHKKMDTGETVKQFLKDYFDFQHDXXXXXXXXXXXXXXXXXXXXXXGIKMFNFQRR 232 YWA+P+AWTLYGLVASQFGD+ K D ETV+QFL+ YF F+HD IK FNFQRR Sbjct: 1359 YWANPVAWTLYGLVASQFGDIQTKLSD-NETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434
BLAST of FC921778 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.605e-13 Identity = 37/77 (48.05%), Postives = 42/77 (54.55%), Query Frame = 2 Query: 2 YWAHPIAWTLYGLVASQFGDMDHKKMDTGETVKQFLKDYFDFQHDXXXXXXXXXXXXXXXXXXXXXXGIKMFNFQRR 232 YW PIAWTLYGLVASQFGD+ D +TV+QFL+ F F+HD GIK FNFQRR Sbjct: 1360 YWGCPIAWTLYGLVASQFGDLQDPLTDQNQTVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436
BLAST of FC921778 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.774e-12 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 2 Query: 5 WAHPIAWTLYGLVASQFGDMDHKKMDTGETVKQFLKDYFDFQHDXXXXXXXXXXXXXXXXXXXXXXGIKMFNFQRR 232 WA P+AWTLYGLVASQ+GD+ + ++ GE V+ +++ YF F+HD IK+FNFQRR Sbjct: 1369 WACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444
BLAST of FC921778 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.371e-11 Identity = 33/77 (42.86%), Postives = 38/77 (49.35%), Query Frame = 2 Query: 2 YWAHPIAWTLYGLVASQFGDMDHKKMDTGETVKQFLKDYFDFQHDXXXXXXXXXXXXXXXXXXXXXXGIKMFNFQRR 232 YWA P+AWTLYGLV SQFG+ D ETVK FL+ + F+HD IK NFQRR Sbjct: 1365 YWACPVAWTLYGLVVSQFGEYTDTMSDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of FC921778 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.737e-11 Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 2 Query: 2 YWAHPIAWTLYGLVASQFGDMDHKKMDTGETVKQFLKDYFDFQHDXXXXXXXXXXXXXXXXXXXXXXGIKMFNFQRR 232 YW P+AWTLYGL+ASQFGD+ D+ +VKQF+++++ ++ GIK FNFQ+R Sbjct: 1347 YWLCPVAWTLYGLIASQFGDITEPMADSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423 The following BLAST results are available for this feature:
BLAST of FC921778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921778 ID=FC921778; Name=FC921778; organism=Citrus sinensis; type=EST; length=245bpback to top |