EY665875

Overview
NameEY665875
Unique NameEY665875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665875_ssr66 microsatellite EY665875_ssr66:66..95. BLAST: Citrus ESTs to Prunus persica proteins V1
EY665875_ssr142 microsatellite EY665875_ssr142:142..153. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665875 vs. ExPASy Swiss-Prot
Match: XPP1_BOVIN (Xaa-Pro aminopeptidase 1 OS=Bos taurus GN=XPNPEP1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.352e-11
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 3
Query:  405 IDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTK 527
            I AYIIPS DAHQSE+IA C  RRA++SGF GSAGTA+VT+
Sbjct:   27 IQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIVTE 67          

HSP 2 Score: 25.0238 bits (53), Expect = 2.352e-11
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  563 FFRAEKQLSSSWILMRSG 616
            F +A KQ+ S+W LM+ G
Sbjct:   79 FLQAAKQMDSNWTLMKMG 96          
BLAST of EY665875 vs. ExPASy Swiss-Prot
Match: XPP1_HUMAN (Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP1 PE=1 SV=3)

HSP 1 Score: 64.3142 bits (155), Expect = 3.053e-11
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 3
Query:  405 IDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTK 527
            I AYIIPS DAHQSE+IA C  RRA++SGF GSAGTA++T+
Sbjct:   27 IQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITE 67          

HSP 2 Score: 25.0238 bits (53), Expect = 3.053e-11
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  563 FFRAEKQLSSSWILMRSG 616
            F +A KQ+ S+W LM+ G
Sbjct:   79 FLQAAKQMDSNWTLMKMG 96          
BLAST of EY665875 vs. ExPASy Swiss-Prot
Match: XPP1_RAT (Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus GN=Xpnpep1 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.144e-11
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 3
Query:  357 EKLRALRELFSRP---GVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTK 527
            E LR LR+           I AYIIPS DAHQSE+IA C  RRA++SGF GSAGTA++T+
Sbjct:    8 ELLRQLRQAMRNSECVAEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITE 67          

HSP 2 Score: 23.8682 bits (50), Expect = 5.144e-11
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  563 FFRAEKQLSSSWILMRSG 616
            F +A KQ+ ++W LM+ G
Sbjct:   79 FLQAAKQMDNNWTLMKMG 96          
BLAST of EY665875 vs. ExPASy Swiss-Prot
Match: XPP1_MOUSE (Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.144e-11
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 3
Query:  357 EKLRALRELFSRP---GVNIDAYIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTK 527
            E LR LR+           I AYIIPS DAHQSE+IA C  RRA++SGF GSAGTA++T+
Sbjct:    8 ELLRQLRQAMRNSEYVAEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITE 67          

HSP 2 Score: 23.8682 bits (50), Expect = 5.144e-11
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  563 FFRAEKQLSSSWILMRSG 616
            F +A KQ+ ++W LM+ G
Sbjct:   79 FLQAAKQMDNNWTLMKMG 96          
The following BLAST results are available for this feature:
BLAST of EY665875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
XPP1_BOVIN2.352e-1173.17Xaa-Pro aminopeptidase 1 OS=Bos taurus GN=XPNPEP1 ... [more]
XPP1_HUMAN3.053e-1170.73Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP... [more]
XPP1_RAT5.144e-1156.67Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus GN=X... [more]
XPP1_MOUSE5.144e-1156.67Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665875 ID=EY665875; Name=EY665875; organism=Citrus sinensis; type=EST; length=870bp
CCCGCGTCCGACCTTCCATTTTTAGTTCCTTAAAACTCAAACCTTATCTT
CATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGAG
AATTGCTAGCATGTACTCACTACCATCACAAGCAATGCGCCCTCTCTCTC
TCTCACCATGCCTCACCAGATCATCTTACCTTCGTTTCCGCATCCTGTCC
TCTCTTTCCCTTCCTCCTATTTTCCATAATTCCCAAACCCGCCTCTCATT
TTCTAAAAATTACACAAGGCCCCATCTTTTTATCAGAAATTGCACTTCCA
TCACCGCCAAGCCATCTTCGGAGTTCAACAGGAACCGGACCCAGGATGCT
CCGGACGAGAAGCTCCGTGCTCTTCGGGAGCTGTTTTCGAGGCCGGGTGT
TAATATTGACGCGTATATCATACCTTCTCAGGATGCTCATCAGAGTGAAT
TCATTGCGGAATGTTATATGAGGAGGGCGTATATATCTGGATTTACGGGC
AGTGCTGGCACTGCTGTTGTTACAAAAGAATAAAGCAGCTCTTTGGAAAG
ATGGTCGTTATTTTCTTCAGGGCTGAAAAACAGTTGAGCTCCAGCTGGAT
TCTCATGCGGAGTGGCAAATCATGGGAGTCCCTACAACTTTTTTGAAAGG
TTAAATGATGTTTTGGGCACCACGAGGGAAAGTTGGGCATTGATCCCCTT
TCTTTTCCCTTCTGAAGCTGCAAAGGAAATAAAGGAGGGTTTAGCTTAAA
AAAAATCTGAATTTAACAATATTGGTATGAACCAACACCTTGGGGGGAGG
TTTATAGAAAAGAAACAAGCGCCAAACCCCCCCAAATAACCCACAAAAAA
GAAACTTCCCCGGAAAATAC
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