EY665873

Overview
NameEY665873
Unique NameEY665873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665873 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 78/222 (35.14%), Postives = 100/222 (45.05%), Query Frame = 1
Query:  100 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHF-TQTSNGSNLSYL-RQAAKSTPFSRLKKLPGNLFTSFSVKPGTIES 666
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F  +   G   ++L R  A++ PF   K         FSV+ G+ E+
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKF--SETLKRFSVEAGSEEA 236          
BLAST of EY665873 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 50/89 (56.18%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  400 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGSNLSYLRQAAKSTPFSRLKKLPGNLFTSFSVKPGTIES 666
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G      R  A + PFS  +K+P  + + FSVKPG++E+
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKF-LPRSEADAMPFSS-EKVP-EILSRFSVKPGSVEA 270          
The following BLAST results are available for this feature:
BLAST of EY665873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RD22_ARATH4.076e-2235.14Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ7.195e-1956.18BURP domain-containing protein 3 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665873 ID=EY665873; Name=EY665873; organism=Citrus sinensis; type=EST; length=881bp
TACATACTATCTTGTATTCTGGGTGTCTTTTAAAACATACTCAAAGCTAT
AATGGAGTTTCACTTGTTGCCCATCCTTGCTTTCCTCAGTCTAGCACTGG
TAGCAAGTCATGCTGACATTTCTCCTGAGCTTTACTGGAAAACTGTACTG
CCAAATTCCCCGATGCCAAAAGCTGTCAAAGATCTTCTACAGCCAGATGT
GCTGGAAGACAAAAGCACCTCTGTCAACGTAGGGAAGGGTGGTGTCAATG
TGGATGCAGGGAAAGGAAAGCCCGGTGGTGGCACCCATGTGAATGTTGGG
GGTAAGGGCGTTGGTGTAAACACTGGAAAGCCTGACAAAAGAACCAGTGT
TGGTGTTGGCAAAGGAGGAGTATCCGTAAGTACAGGACACAAGGGAAAGC
CAGTTTATGTTGGAGTAAGCCCATTCAACTATGTATATGCTGCAAATGAG
AACCAACTCCATGATGACCCGAATACAGCTCTTTTCTTCTTGGAAAAGGA
CTTGCATCCTGGCATGAAGATGAACTTGCACTTCACTCAAACTTCAAATG
GGAGCAACCTTTCTTATCTCCGCCAAGCTGCCAAATCAACTCCCTTTTCT
CGTCTGAAAAAATTGCCTGGAAATCTTTTTACCAGTTTTTCGGTGAAACC
TGGAACAATTGAAAGCTGAAATAATGGAAAAACACAATTCAAAAAGGGTG
AAAACCCTGGCATTAAAGGGAAAAAAAAAAAATGGTGGAAACTTCCCTGG
GAATCATTGAATTGAATTCCCCCACTTTCTAAACTTGGGAAAAAAGGGTT
CCGGGCCAATTTTCTACCGGAGGGAAAAAAAAGGAAACCCAAAAGAGGAA
AAATTAAAAACAATCCGGTGTGGGGAAGGGA
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