EY665865

Overview
NameEY665865
Unique NameEY665865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665865 vs. ExPASy Swiss-Prot
Match: TIC_ARATH (Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN=TIC PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 3 
Query:    3 SKAGVDSVSPQTFAMTFAPINGAATAPGFDISSIAHNPALLQSLPEAFRHNYQIVXXXXXXXXKKNYRVSEE-----SKNGGHDASNA-EEERKSMTGKPPATV----GQSIAFS-RQDLTDAQVSAMTSNTVLDSSTRTLNLVSVPARSNVSV 431
            SKAGV+S     +AMTFA  NGA TAP  ++SSIA N A+  S+PEA R  YQ++        K NY  S E     S  G   A+N  EE+RKS  G    T     GQSIAFS +QDL DA VSA+TS +++DSS+R LNL S   +S+ S+
Sbjct: 1019 SKAGVESFQSPGYAMTFATFNGANTAPTLNMSSIAQNHAMFHSMPEAARQGYQMM-AAQAAQQKMNYGASLEDGKSGSIGGAATANNTPEEQRKSGGGAIGKTSGGNGGQSIAFSNKQDLADASVSAVTSGSIVDSSSRLLNLGSALPQSSGSL 1171
The following BLAST results are available for this feature:
BLAST of EY665865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIC_ARATH2.657e-2147.40Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665865 ID=EY665865; Name=EY665865; organism=Citrus sinensis; type=EST; length=884bp
GCTCCAAGGCTGGAGTTGATTCTGTGTCACCTCAAACTTTTGCAATGACA
TTTGCTCCTATTAATGGTGCTGCTACAGCTCCTGGGTTTGACATTTCTTC
CATTGCACATAATCCTGCTCTTCTTCAGAGCCTTCCAGAGGCTTTTAGGC
ATAACTACCAGATTGTGGCTGCTGCCCAGGCAGCACAGCAGAAAAAGAAT
TACCGTGTTTCTGAAGAAAGCAAAAATGGAGGTCATGATGCTTCTAATGC
GGAAGAAGAAAGAAAGTCGATGACTGGAAAACCACCTGCAACTGTTGGGC
AGTCCATTGCTTTCTCAAGGCAGGATTTAACTGATGCACAGGTTTCTGCA
ATGACAAGCAACACTGTACTTGATAGTTCAACACGAACCCTTAACCTTGT
TTCTGTGCCTGCCCGGAGTAATGTTTCAGTTATGCCTGCTTCTATGAGCA
ATGCCAATGCTTCTGCTGCGCAGCAGCAACTGCAGCGGAGTCAGCAACAA
ATGATGCATCTTCAGAAAGCACCAGCAGTTTGCTGCTGCCCCCCCCAACG
AAGCAAAACCCCAGCAAACAAGTAATGGAACTGGTTAACTTCTGACCATC
TACCTGCATTCATCTATGGTTGCAAGGTTCCTAAATACCTTGGTCTGAAT
TTCCACAAAACCTTGTCCAAAGTAACACCCCCCATCCTAATCCTCCCCAT
GGAAAAAATTCTGGGAAGGAAAACACTTTCTCAGTTGCTTCCCAATCTCT
TGGGGCCCCTTTCCACAATCTTCCTTAAAAAAATCTTTCCCCCACAACCA
AAGGAAAAAAAACAGCAAAGCCCCACCCCAAATATTATTTTGCCAACACA
CCCCAAAAATCTCTCTCCCCCTCACAGGGGGAAA
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