EY665857

Overview
NameEY665857
Unique NameEY665857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.727e-62
Identity = 137/228 (60.09%), Postives = 154/228 (67.54%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK----GIGAVGKCG--RRRSGTKTI*RRGLFFPTNEGIWRTSXXXXXXXXXXXXXG--DTFPFKKPRGIWAVGTPSKVLGLPLNH*GLEKGCP*KKIL 842
            D FPA LRVLVVDDDPTCL ILE+ML TCLY VTKCNRAE AL +LR NKNG+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW       G++   G  R R               NEG  R+S                D+   KKPR +W+V    + +   +N  G++K  P KKIL
Sbjct:   22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVA-AVNQLGVDKAVP-KKIL 247          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.946e-62
Identity = 137/240 (57.08%), Postives = 160/240 (66.67%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEW---KGIGAVGKCGRRRSGTKTI*RRGLFF------------PTNEG-IWRTSXXXXXXXXXXXXXG----DTFPFKKPRGIWAVGTPSKVLGLPLNH*GLEKGCP*KKIL 842
            + FP+GLRVLVVDDDPTCL ILE+ML TCLYEVTKCNRAE+AL +LR NK+G+DIVISDVHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW   +  G++ + G R+         G                 NEG  WR+S                  D    KKPR +W+V    + +   +N  G+EK  P KKIL
Sbjct:   31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVA-AVNQLGVEKAVP-KKIL 268          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.677e-49
Identity = 114/228 (50.00%), Postives = 135/228 (59.21%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRK------NEWKGIGAVGKCGRRRSGTKTI*RRGLFFPTNEGIWRTSXXXXXXXXXXXXXGDTFPFKKPRGIWAVGTPSKVLGLPLNH*GLEKGCP*KKILGI 848
            DQFP G+RVL VDDD TCLRIL+ +L  C Y VT  N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLE VGLEMDLPVIM+SA    + VMKGV HGACDYL+KPVRIE LKNIWQHVVRK K      N   G G   K  R+R                    +                D    KKPR +W     +K L   ++H G+E+  P KKIL +
Sbjct:   11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANRKR--------------------KEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLA-AVDHLGVERAVP-KKILDL 216          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.190e-49
Identity = 117/224 (52.23%), Postives = 139/224 (62.05%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKGIGAVGKCGRRRSGTKTI*RRGLFFPTN--EGIWRTSXXXXXXXXXXXXXGDTFPFKKPRGIWAVGTPSKVLGLPLNH*GLEKGCP*KKILGI 848
            DQFP G+RVL VDDD TCL+ILE +L  C Y VT  N+A+ AL++LR NKN +D+VISDV MPDMDGFKLLE VGLEMDLPVIM+SA    + VMKGVTHGACDYL+KPVRIE LKNIWQHVVR R ++ +G    G   R  SG + +   G   P N      R                D+   KK R +W V    K +   +N  G EK  P KKIL +
Sbjct:   11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGD-KRDGSGNEGV---GNSDPNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVA-AVNQLGYEKAMP-KKILDL 228          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.048e-46
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 3
Query:  192 PAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKGIGAVG 593
            P GLRVLVVDDDPT L+ILEKML  C YEVT C  A  AL +LR  K+GYDIVISDV+MPDMDGFKLLE VGLE+DLPVIMMS D     VMKGV HGACDYL+KP+R++ LK IWQHV+RK+  E + I   G
Sbjct:    8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG 141          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.224e-43
Identity = 83/127 (65.35%), Postives = 104/127 (81.89%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVG-LEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKR 560
            DQFP+GLR+LVVDDD +CL ILEKML   +Y+VT C++A++AL +LR  K+ +D+V+SDVHMP M+G+ LL+QVG LEMDLPVIMMS D     VM G+ HGACDYLIKP+R E LKNIWQHVVR++
Sbjct:    5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRK 131          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 3
Query:  183 DQFPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRK 557
            D+FP G+RVL VDD+PTCLR LE++L  C Y VTK   +  AL+MLR N N +D+VISDV MPD DGFKLLE +GLEMDLPVIM+SA      VMKG+ HGACDYL+KPV ++ L+NIW HVV+K
Sbjct:   12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 135          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: APRR4_ARATH (Putative two-component response regulator-like APRR4 OS=Arabidopsis thaliana GN=APRR4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.205e-25
Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 3
Query:  189 FPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRK 563
            FP GLRVLV D+DP+ L ILE+ L    Y+VT CN    A+  LR ++N +D+ +  V+  + D F+ L ++G EMDLP+I++S DDS + V K + +GA DYLIKP+R E L+ +++H+V+K +
Sbjct:   38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMR 162          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.184e-24
Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 3
Query:  189 FPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKGIGAVG 593
            +P GLRVLV+DDD + L ++E +L  C Y+VT       A+  +  N    D+VISD   P  DG  +L++V  +  +P ++M++      VMK V +GA D+L+KPVRIE L NIWQH+ RK+  + K    VG
Sbjct:    7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVG 141          
BLAST of EY665857 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.184e-24
Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 3
Query:  189 FPAGLRVLVVDDDPTCLRILEKMLGTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKGIGAVG 593
            +P GLRVLV+DDD + L ++E +L  C Y+VT       A+  +  N    D+VISD   P  DG  +L++V  +  +P ++M++      VMK V +GA D+L+KPVRIE L NIWQH+ RK+  + K    VG
Sbjct:    7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVG 141          
The following BLAST results are available for this feature:
BLAST of EY665857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ARR2_ARATH1.727e-6260.09Two-component response regulator ARR2 OS=Arabidops... [more]
ARR1_ARATH2.946e-6257.08Two-component response regulator ARR1 OS=Arabidops... [more]
ARR10_ARATH1.677e-4950.00Two-component response regulator ARR10 OS=Arabidop... [more]
ARR12_ARATH2.190e-4952.23Two-component response regulator ARR12 OS=Arabidop... [more]
ARR11_ARATH5.048e-4668.66Two-component response regulator ARR11 OS=Arabidop... [more]
ARR14_ARATH5.224e-4365.35Two-component response regulator ARR14 OS=Arabidop... [more]
ARR18_ARATH4.139e-4064.00Two-component response regulator ARR18 OS=Arabidop... [more]
APRR4_ARATH2.205e-2545.60Putative two-component response regulator-like APR... [more]
EHD1_ORYSJ3.184e-2441.48Two-component response regulator EHD1 OS=Oryza sat... [more]
EHD1_ORYSI3.184e-2441.48Two-component response regulator EHD1 OS=Oryza sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665857 ID=EY665857; Name=EY665857; organism=Citrus sinensis; type=EST; length=859bp
TCACTTCAATCTCTCAAAAAATATTTTTTTCCCTTAATAATAAACTCAAA
TCTCTCTTCTATCTCTATAATTCTTTGCGTATCTCATCTGGGTTCTTTGA
ATTTCGAACTGGTTTTTGAGATATGAATCTCAATAACGATAAAGGATCCA
TGTCAACGGCTAGTTCAAGTGTTACTGTTTCCGATCAGTTTCCGGCTGGC
TTACGTGTCCTTGTTGTTGATGATGATCCTACTTGTCTTAGGATCTTGGA
GAAGATGCTTGGGACTTGTCTTTATGAAGTTACAAAATGCAATCGAGCAG
AGATTGCTTTGGATATGCTTCGAACGAACAAGAATGGGTACGATATTGTT
ATCAGTGATGTTCATATGCCAGATATGGATGGATTCAAACTCCTTGAGCA
GGTCGGGCTGGAGATGGACCTGCCGGTTATCATGATGTCTGCGGATGATA
GCAAACAAGTTGTCATGAAAGGTGTTACTCACGGTGCTTGTGATTATTTA
ATTAAGCCAGTTCGAATTGAGGCACTGAAGAACATATGGCAGCATGTGGT
TCGGAAGAGGAAAAACGAGTGGAAGGGAATTGGAGCAGTCGGGAAGTGTG
GAAGAAGGAGATCGGGCACCAAAACCATCTGAAGAAGGGGATTATTCTTC
CCCACAAATGAAGGAATTTGGAGAACCTCCAAGAGGAAGAAAAAAGAGGA
AAAAAAATTTGAAAAAAAGGGTGATACCTTCCCTTTTAAAAAACCCCGGG
GAATTTGGGCAGTTGGAACTCCTTCTAAAGTTTTGGGTCTGCCGTTAAAC
CACTAAGGCTTGGAAAAAGGTTGTCCCTAAAAAAAAATTTTGGGAATTAG
AGAAAGGTC
back to top