FC921765

Overview
NameFC921765
Unique NameFC921765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length221
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:1482..1702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.997e-24
Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  480 EMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 534          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.448e-24
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  479 EMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.448e-24
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  479 EMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 9.910e-24
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR 169
            EMTG NVTECIGGSRTVT+DDLSSRYHTHCDPRLNASQSLELAFI+AERLRKRR
Sbjct:  465 EMTGQNVTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRR 518          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.690e-23
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVTFDDLS RYHTHCDPRLNASQSLELAFIIAERLR+RR+
Sbjct:  470 EMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRM 524          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.883e-23
Identity = 49/55 (89.09%), Postives = 54/55 (98.18%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTEC+GGSRT+T++DLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  442 EMTGQNVTECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 496          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.096e-22
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  452 EMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.096e-22
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  452 EMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.096e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    8 EMTGPNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 172
            EMTG NVTECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERLR++RI
Sbjct:  484 EMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRI 538          
BLAST of FC921765 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.810e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 2
Query:   29 TECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRK 163
            TEC+GGSRT+T+DD  +RYHTHCDPRLNASQSLELAFIIAERLRK
Sbjct:  439 TECVGGSRTITYDDRQTRYHTHCDPRLNASQSLELAFIIAERLRK 483          
The following BLAST results are available for this feature:
BLAST of FC921765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AROF_TOBAC1.997e-2496.36Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC4.448e-2494.55Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU4.448e-2494.55Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH9.910e-2494.44Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ1.690e-2392.73Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ARATH2.883e-2389.09Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLTU1.096e-2287.27Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC1.096e-2287.27Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ1.096e-2289.09Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO1.810e-1786.67Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionC06052B01T7 RindPdigS Citrus sinensis cDNA clone C06052B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921765 ID=FC921765; Name=FC921765; organism=Citrus sinensis; type=EST; length=221bp
CATTTGCGAGATGACAGGCCCGAATGTGACAGAGTGCATCGGTGGGTCCA
GAACAGTGACCTTCGACGACTTGAGTTCACGCTACCACACCCACTGTGAC
CCTAGGCTCAATGCTTCACAGTCCCTTGAGCTTGCCTTCATCATTGCCGA
GCGCCTCAGAAAGAGGAGGATTAGCTCACAGCAACCTCTTGCCTCTTCTT
CTCTCCTGTAGAATGGCCCGA
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