CK936875

Overview
NameCK936875
Unique NameCK936875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936875 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSJ (Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.578e-24
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  291 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS-NDLVPCEDPICASLHAP--GHHNCEDPAQCDYELEY 581
            S+++ ++HGNVYP G++ +TM IG PA+ YFLD+DTGS LTWLQCDAPC  C   PH LY+P+   LV C D +C  L+        C    QCDY ++Y
Sbjct:   22 SAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHVLYKPTPKKLVTCADSLCTDLYTDLGKPKRCGSQKQCDYVIQY 121          
BLAST of CK936875 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSI (Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.336e-23
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  291 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS-NDLVPCEDPICASLHAPGHH--NCEDPAQCDYELEY 581
            S+++ ++HGNVYP G++ VTM IG PA+PYFLD+DTGS LTWLQCD PC+ C + PH LY+P     V C +  CA L+A       C    QC Y ++Y
Sbjct:   22 SAVVLELHGNVYPIGHFFVTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGLYKPELKYAVKCTEQRCADLYADLRKPMKCGPKNQCHYGIQY 121          
The following BLAST results are available for this feature:
BLAST of CK936875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP1_ORYSJ1.578e-2450.00Aspartic proteinase Asp1 OS=Oryza sativa subsp. ja... [more]
ASP1_ORYSI1.336e-2350.00Aspartic proteinase Asp1 OS=Oryza sativa subsp. in... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004517_A10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936875 ID=CK936875; Name=CK936875; organism=Citrus sinensis; type=EST; length=582bp
TTTTTTTTTTGAAAAAAATATTAATCATAACAGGTTCCTGGTAGATTGAG
TTGGAGCAGAAACTATGCTGCCAAAGGCATCAAATTTATTTGTGCATTAT
ATAGTAACTAAAAAGATGGGAAAAGGGAAGGTGGGTTTGGTGATGGCATT
GGTATTGGTGTCTTTTGTCATTTCCACATCTTCTAGTGATGAAGAGCAGC
CACAATGGAGAAAATCTCTGTTTTCCAACTGTAAGGATGTCGTCCTCATC
CTCTTCCTCTTCCTCTTCATCGTTGTTCAATCATGTAGGCTCTTCCCTTT
TGTTCCAGGTCCACGGAAATGTATATCCTACTGGATACTATAATGTTACC
ATGTACATAGGACAGCCAGCAAGACCTTACTTTCTTGATCTGGATACCGG
TAGTGATCTCACTTGGCTCCAATGTGATGCACCATGTGTCCGGTGTGTTG
AGGCACCTCATCCGCTTTACAGACCAAGCAATGACCTTGTGCCTTGCGAG
GACCCCATTTGTGCATCCTTGCATGCACCTGGTCACCACAATTGTGAAGA
CCCTGCACAATGTGACTATGAGCTTGAATATG
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