CK936783

Overview
NameCK936783
Unique NameCK936783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1146 contig Csv1_Contig1146:1..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF7_MOUSE (Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.280e-29
Identity = 77/239 (32.22%), Postives = 130/239 (54.39%), Query Frame = 3
Query:  147 PSGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSAT--PASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            PS  +    GN+   R P A  QP+ PA   + F+  D G     PAS    +           FD+E PLL+ELGI+ D IW+KT ++LNP +  + ++   +DL+GPI+  ++ G   L+AGK QFG + G   +  + ++ + N+++  N  +      SV+GYC+LP+ +L++ ++F    G I    +   + W + +++ + +S A   E  + L+AY C L+Y LF+LL +F
Sbjct:   23 PSCNDSNAYGNVYGYREPQATEQPSSPAPPEM-FLPSDYGGQLFQPASN---LDYYSQSPSVDTFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATLLMAGKAQFGYVYGMSAIGCLGIHALLNLMS--NSGVSYGCVASVLGYCLLPMVLLSSCAVFFSLQGTIGTMSALLIITWCSLSASKIFIS-ALAMEGQQLLVAYPCALLYGLFALLTVF 254          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_XENTR (Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.373e-27
Identity = 64/176 (36.36%), Postives = 113/176 (64.20%), Query Frame = 3
Query:  333 FDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            FDDE PLL+ELGI+ D IW+KT ++L+P +V +  +   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + +Y + N+++     +     +SV+GYC+LP+ IL++F++     G +   ++A  + W + +++ + +S LA  G++   L+AY C L+Y +F+L+ +F
Sbjct:   85 FDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQ--VLVAYPCALLYGVFALISVF 256          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_XENLA (Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.342e-27
Identity = 64/176 (36.36%), Postives = 113/176 (64.20%), Query Frame = 3
Query:  333 FDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            FDDE PLL+ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + +Y + N+++     +     +SV+GYC+LP+ IL+ F++     G +   ++A  + W + +++ + +S LA  G++   L+AY C L+Y +F+L+ +F
Sbjct:   85 FDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAMGCLGMYCLLNLMS--MTGVSFGCVSSVLGYCLLPMIILSTFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 256          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF7_HUMAN (Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27
Identity = 79/240 (32.92%), Postives = 127/240 (52.92%), Query Frame = 3
Query:  150 SGGNPTTAGNINQRRVPTAPFQPNRPASSAIPFMSFDIGSA----TPASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFR-VNPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            SG +    GN+   R   A  QP +PAS     M    G A     PAS                FD+E PLL+ELGIH D IW+KT ++LNP + V+ ++   +DL+GPI+  ++ G   LLAGK+QFG + G   +  + ++ + N+++  +  +      SV+GYC+LP+ IL+  ++F    G      S   + W + +++ + ++ A   E  + L+AY C ++Y LF+LL IF
Sbjct:   48 SGNDSNAYGNLYGSRKQQAGEQP-QPASFVPSEMLMSSGYAGQFFQPASNSD---YYSQSPYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMS--SSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSLSASKIFIA-ALHMEGQQLLVAYPCAILYGLFALLTIF 280          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_BOVIN (Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.995e-27
Identity = 70/223 (31.39%), Postives = 125/223 (56.05%), Query Frame = 3
Query:  189 RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            R VP    QP +P +  I   +      TP  + G             F+DE PLL+ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + ++ + N+++     +      SV+GYC+LP+ +L++F++     G +   ++A  + W + +++ + +S A   E  + L+AY C L+Y +F+L+ +F
Sbjct:   49 RFVPADMMQPQQPYTGQIFQPTQTYTPTTPQPFYG-----------NNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_PONAB (Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.217e-27
Identity = 70/223 (31.39%), Postives = 126/223 (56.50%), Query Frame = 3
Query:  189 RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            R VP    QP +P +  I   +     A+P  + G             F+DE PLL+ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + ++ + N+++     +      SV+GYC+LP+ +L++F++     G +   ++A  + W + +++ + +S A   E  + L+AY C L+Y +F+L+ +F
Sbjct:   49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPFYG-----------NNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_MACFA (Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.217e-27
Identity = 70/223 (31.39%), Postives = 126/223 (56.50%), Query Frame = 3
Query:  189 RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            R VP    QP +P +  I   +     A+P  + G             F+DE PLL+ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + ++ + N+++     +      SV+GYC+LP+ +L++F++     G +   ++A  + W + +++ + +S A   E  + L+AY C L+Y +F+L+ +F
Sbjct:   49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPFYG-----------NSFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_HUMAN (Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.217e-27
Identity = 70/223 (31.39%), Postives = 126/223 (56.50%), Query Frame = 3
Query:  189 RRVPTAPFQPNRPASSAIPFMSFDIGSATPASYGGPIXXXXXXXXXXXFDDEEPLLDELGIHPDQIWKKTKSILNPFRV-NPTVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVSLADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            R VP    QP +P +  I   +     A+P  + G             F+DE PLL+ELGI+ D IW+KT ++L+P +V + ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + ++ + N+++     +      SV+GYC+LP+ +L++F++     G +   ++A  + W + +++ + +S A   E  + L+AY C L+Y +F+L+ +F
Sbjct:   49 RFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPFYG-----------NNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFIS-ALAMEGQQLLVAYPCALLYGVFALISVF 257          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_RAT (Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.417e-26
Identity = 60/176 (34.09%), Postives = 112/176 (63.64%), Query Frame = 3
Query:  333 FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNP-TVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            F++E PLL+ELGI+ D IW+KT ++L+P R +  ++   +DL+GP+V  L+FG   LLAGK+QFG + G   +  + ++ + N+++     +      SV+GYC+LP+ +L++F++     G +   ++A  + W + +++ + +S LA  G++   L+AY C L+Y +F+L+ +F
Sbjct:   86 FEEEPPLLEELGINFDHIWQKTLTVLHPLRASDGSIMNETDLAGPVVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMS--MTGVSFGCVASVLGYCLLPMILLSSFAVVFSLQGMVGILLTATIIGWCSFSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257          
BLAST of CK936783 vs. ExPASy Swiss-Prot
Match: YIPF5_DANRE (Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.417e-26
Identity = 61/176 (34.66%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  333 FDDEEPLLDELGIHPDQIWKKTKSILNPFRVNP-TVHKGSDLSGPIVLYLSFGLFQLLAGKLQFGVILGWIVVSSIFLYVVFNMLAGRNGNLDLHTCTSVVGYCMLPVAILAAFSLFLPXGGAIRFAVSAXXVLWAARASTNLMVS-LADGGEEHRGLIAYACFLIYTLFSLLCIF 854
            F+DE PLL+ELGI+ D IW+KT ++L+P + +  ++   +DL+GP+V  L+FG   LL GK+QFG + G   +  + +Y + N+++     +      SV+GYC+LP+ IL++F +     G +   ++A  + W + +++ + +S LA  G++   L+AY C L+Y +F+L+ +F
Sbjct:   86 FEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGPMVFCLAFGATLLLTGKIQFGYVYGISAIGCLGMYCLLNLMS--MTGVSFGCVASVLGYCLLPMIILSSFGVIFSLQGIMGIILTAAIIGWCSLSASKIFISALAMDGQQL--LVAYPCALLYGVFALISVF 257          
The following BLAST results are available for this feature:
BLAST of CK936783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
YIPF7_MOUSE7.280e-2932.22Protein YIPF7 OS=Mus musculus GN=Yipf7 PE=2 SV=1[more]
YIPF5_XENTR1.373e-2736.36Protein YIPF5 OS=Xenopus tropicalis GN=yipf5 PE=2 ... [more]
YIPF5_XENLA2.342e-2736.36Protein YIPF5 OS=Xenopus laevis GN=yipf5 PE=2 SV=1[more]
YIPF7_HUMAN3.059e-2732.92Protein YIPF7 OS=Homo sapiens GN=YIPF7 PE=1 SV=2[more]
YIPF5_BOVIN3.995e-2731.39Protein YIPF5 OS=Bos taurus GN=YIPF5 PE=2 SV=1[more]
YIPF5_PONAB5.217e-2731.39Protein YIPF5 OS=Pongo abelii GN=YIPF5 PE=2 SV=1[more]
YIPF5_MACFA5.217e-2731.39Protein YIPF5 OS=Macaca fascicularis GN=YIPF5 PE=2... [more]
YIPF5_HUMAN5.217e-2731.39Protein YIPF5 OS=Homo sapiens GN=YIPF5 PE=1 SV=1[more]
YIPF5_RAT4.417e-2634.09Protein YIPF5 OS=Rattus norvegicus GN=Yipf5 PE=2 S... [more]
YIPF5_DANRE4.417e-2634.66Protein YIPF5 OS=Danio rerio GN=yipf5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_A04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936783 ID=CK936783; Name=CK936783; organism=Citrus sinensis; type=EST; length=856bp
GGGGATCGCACGTCCATCTTCTTAACTCGTAAGAAAACCCCAAGCGAAGG
GAGGAATTCATTCAATTAATCAAACCCTAATTTGAATCCCCAAAAGGATT
TCAGGTAACGATGACGAAGGAATTTTCGGTCCCACCAGTAGTATTCCCTT
CGGGCGGCAATCCTACTACCGCCGGCAACATTAACCAGCGCCGGGTCCCA
ACGGCGCCGTTTCAGCCCAACCGCCCTGCGAGCTCCGCGATCCCCTTCAT
GTCCTTCGATATCGGTTCCGCAACTCCGGCGTCCTACGGTGGTCCAATTT
CCACTTCCACGTCAGCCGGTGGGTCCGCGTCATTCGACGACGAAGAGCCT
CTACTCGACGAGCTCGGTATCCACCCAGACCAAATCTGGAAAAAGACAAA
GTCAATTTTAAATCCGTTTCGTGTAAATCCGACGGTTCACAAAGGTTCGG
ATCTATCCGGCCCGATTGTACTTTACCTTTCATTCGGACTCTTTCAACTC
CTCGCTGGCAAGCTTCAATTCGGCGTGATTCTTGGTTGGATCGTGGTCTC
GTCGATCTTTTTGTATGTTGTCTTTAACATGCTAGCGGGACGTAATGGGA
ATCTTGACTTGCACACGTGTACCAGCGTGGTTGGTTACTGTATGCTACCG
GTGGCGATCCTAGCGGCATTTTCTCTGTTCTTGCCGCANGGTGGGGCGAT
TCGGTTTGCCGTGTCCGCGGNNNTTGTGCTGTGGGCGGCGAGGGCTTCCA
CGAATCTGATGGTTTCGTTGGCTGATGGAGGAGAGGAACACCGCGGGTTG
ATTGCGTATGCTTGTTTCTTGATTTACACACTGTTTTCACTTCTTTGTAT
ATTTTG
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