CK936498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936498 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.616e-43 Identity = 85/148 (57.43%), Postives = 109/148 (73.65%), Query Frame = 3 Query: 117 MPRPYFHKLILASTIRDKRLRILENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQYHIFAEMEDDDSEHVDQPTVNKTFNPPS 560 MPRP+FHKLI +STI++KRLR+ + FV FKD+LS A L VP+G V RVGLR+ DNK+WF DGWQEF++RY IRIGY L+FRYEGNSAF+VYIFNL SEINY L + NH K+ +F ++ED+D+E + +V + P S Sbjct: 1 MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMD-SAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPES 147
BLAST of CK936498 vs. ExPASy Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 3 Query: 111 PKMPRPYFHKLILASTIRDKRLRILENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNAL 443 P+ P F KL+L ST++DK +RI FV+ LS TL+ P G + L+R+ ++WF++GW EF E + I G+FL+F Y+ NS+F V IFN + E NY +A+ Sbjct: 23 PESPVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAV 133
BLAST of CK936498 vs. ExPASy Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 111 PKMPRPYFHKLILASTIRDKRLRILENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNAL 443 P+ P F KL+L ST++DK ++I FV+ LS TL P G + L+R+ ++WF++GW EF E + I G+FL+F Y+ NS+F V IFN+ + E Y +A+ Sbjct: 23 PESPVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 133
BLAST of CK936498 vs. ExPASy Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 132 FHKLILASTIRDKRLRILENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNAL--SNFEVPNHSKQYHIFAEMEDDDSEHVDQPTVNK 542 F K+IL S I +K +++ FVR F L+ TL P G + ++R+ ++VWF GW EF E + + G+FL F YEG+S F V IF++ +SEI Y + + EV + +Q E DDD E VD + K Sbjct: 34 FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVDMDELLK 171 The following BLAST results are available for this feature:
BLAST of CK936498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936498 ID=CK936498; Name=CK936498; organism=Citrus sinensis; type=EST; length=688bpback to top |