CK936495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT4_ARATH (Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 2.194e-114 Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRDM Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDM 214 HSP 2 Score: 50.0618 bits (118), Expect = 2.194e-114 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT12_ARATH (Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 2.194e-114 Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRDM Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDM 214 HSP 2 Score: 50.0618 bits (118), Expect = 2.194e-114 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 382.104 bits (980), Expect = 2.863e-114 Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+ Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDV 214 HSP 2 Score: 50.0618 bits (118), Expect = 2.863e-114 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 4.874e-114 Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDV 214 HSP 2 Score: 50.0618 bits (118), Expect = 4.874e-114 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2) HSP 1 Score: 380.948 bits (977), Expect = 6.360e-114 Identity = 190/201 (94.53%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDI 214 HSP 2 Score: 50.0618 bits (118), Expect = 6.360e-114 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.083e-113 Identity = 192/201 (95.52%), Postives = 192/201 (95.52%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDM Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDM 214 HSP 2 Score: 47.7506 bits (112), Expect = 1.083e-113 Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MAD EDIQPLVCDNGTGMVKAG Sbjct: 1 MADAEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.083e-113 Identity = 192/201 (95.52%), Postives = 192/201 (95.52%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDM Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDM 214 HSP 2 Score: 47.7506 bits (112), Expect = 1.083e-113 Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MAD EDIQPLVCDNGTGMVKAG Sbjct: 1 MADAEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.083e-113 Identity = 192/201 (95.52%), Postives = 192/201 (95.52%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDM Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDM 214 HSP 2 Score: 47.7506 bits (112), Expect = 1.083e-113 Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MAD EDIQPLVCDNGTGMVKAG Sbjct: 1 MADAEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1) HSP 1 Score: 380.178 bits (975), Expect = 1.083e-113 Identity = 190/201 (94.53%), Postives = 192/201 (95.52%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGY FTTTAEREIVRD+ Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDI 214 HSP 2 Score: 50.0618 bits (118), Expect = 1.083e-113 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 1.843e-113 Identity = 189/201 (94.03%), Postives = 193/201 (96.02%), Query Frame = 1 Query: 163 NG*GWV----AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 NG G V AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL LYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 14 NGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDI 214 HSP 2 Score: 50.0618 bits (118), Expect = 1.843e-113 Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 Query: 113 MADGEDIQPLVCDNGTGMVKAG 178 MADGEDIQPLVCDNGTGMVKAG Sbjct: 1 MADGEDIQPLVCDNGTGMVKAG 22 The following BLAST results are available for this feature:
BLAST of CK936495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936495 ID=CK936495; Name=CK936495; organism=Citrus sinensis; type=EST; length=754bpback to top |