CK936481

Overview
NameCK936481
Unique NameCK936481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2984 contig Csv1_Contig2984:102..799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.716e-51
Identity = 100/161 (62.11%), Postives = 114/161 (70.81%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIP+FFG RR++V DPFSLDVWDPF+DFPFP+  SSA   +F  E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.109e-50
Identity = 100/161 (62.11%), Postives = 113/161 (70.19%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIPSFFG RRS+V DPFSLDVWDPF+DFPF +   SALS+ FP E SA V+ RVDWKETPEAHVFKADLPG+              LQISG+R +EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KA+ME+G                  I+ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNN---SALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 100/161 (62.11%), Postives = 110/161 (68.32%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIPSFFG RRSSV DPFSLDVWDPF+DFPFPS  S+        E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG   RRFRLPEN K+DQ+KASME+G                 AI+ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.560e-48
Identity = 98/161 (60.87%), Postives = 110/161 (68.32%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIPSFF  RRS+V DPFSLDVWDP +DFPF +   S+ S+ FP E  A V+ RVDWKETPEAHVFKADLPGL              LQISG+R +EKEDKND WHRVERSSG F RRFRLPEN KMD++KASME+G                 +IEISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSN---SSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47
Identity = 97/161 (60.25%), Postives = 109/161 (67.70%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIPS FG RRS+V DPFSLDVWDPF+DF FP+  S+        E SA VN RVDWKETPEAHVF+AD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46
Identity = 95/161 (59.01%), Postives = 109/161 (67.70%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIP FFG RRS+V DPFSLD+WDPF+DF  P+   SA       E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F+RRFRLPEN K++++KASME+G                 AIEISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 94/162 (58.02%), Postives = 110/162 (67.90%), Query Frame = 1
Query:   52 MSLIPSFFGN-RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MS+IPSFF N RRS++ DPFSLDVWDPF++           SS    E SA+VNARVDW+ETPEAHVFKADLPGL              L+ISG+R +EKEDKNDTWHRVERSSG F+RRFRLPENVKMDQ+KA+ME+G                 +I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT---------SSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 94/161 (58.39%), Postives = 110/161 (68.32%), Query Frame = 1
Query:   52 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MS+IPSFFG RRS+V DPFSLDVWDPF+DFP  +  SSA  S+F  ET+A VN  +DWKETP+AHVFKADLPGL              LQISG+R  EKE+KND WHRVERSSG F RRFRLPEN K+D++KA+M +G                 AI+ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVT--SSA--SEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45
Identity = 90/140 (64.29%), Postives = 104/140 (74.29%), Query Frame = 1
Query:   52 MSLIPSFFGNRR--SSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 465
            MSLIPSFFGN R  +S+ DPFSLDVWDPF++  FPS  S         ETSA+ NARVDWKET EAHVFKADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132          
BLAST of CK936481 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43
Identity = 94/162 (58.02%), Postives = 105/162 (64.81%), Query Frame = 1
Query:   52 MSLIPSFFGNRRS-SVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 534
            MSLIP  FG+RRS SV DPFS+DV+DPF++  F    S         ETSA  N R+DWKETPEAHVFKADLPGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN KMDQ+KASME+G                 +IEISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSG--------ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
The following BLAST results are available for this feature:
BLAST of CK936481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
HSP16_SOYBN3.716e-5162.1118.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA4.109e-5062.1118.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOYBN4.543e-4962.1117.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA6.560e-4860.8718.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP13_SOYBN3.256e-4760.2517.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN2.756e-4659.0117.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH3.980e-4558.0217.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_DAUCA5.198e-4558.3917.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS178_ARATH6.789e-4564.2917.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP12_SOLPE3.725e-4358.0217.6 kDa class I heat shock protein OS=Solanum per... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_H03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936481 ID=CK936481; Name=CK936481; organism=Citrus sinensis; type=EST; length=698bp
GCGGGGATCAGCNNNAAAATACCGAAAGCCGTATCACTCTATTGAGAAAC
GATGTCGTTGATTCCAAGCTTCTTCGGAAACCGACGCAGCAGTGTCTCGG
ATCCATTTTCACTCGACGTTTGGGATCCATTCAGGGACTTCCCTTTCCCT
TCCGGTTATTCGTCTGCGCTGTCCTCTCAGTTCCCTCCAGAAACCTCTGC
TGTCGTTAATGCCCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGTGT
TCAAGGCCGATCTTCCGGGGCTCCGGAAAGAGGAAGTGAAGGTCGAGGTC
GAAGACGACAGGGTGCTTCAGATAAGCGGTCAGAGGAAGATTGAGAAGGA
AGACAAGAACGACACGTGGCATCGCGTTGAGCGCAGCAGTGGCATGTTCT
CAAGGAGGTTCAGGTTACCTGAGAATGTGAAGATGGATCAGATTAAGGCT
TCCATGGAGAGTGGTGTGCTCACTGTTACTGTTCCGAAAGTGGAGGTGAC
CAAACCTGATGTTAAGGCTATCGAAATCTCTGGTTAAACCAGTGTCTGTC
TGTATGTCTTTATGCATACTTGTATAAGGATGCTGTGATGTTTTGGTTTT
GTAATTTGCTTGCATGAATGTTTGTGTAATGGTATTCTGGGTGTAATCAA
TAAACTGGACTGTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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