CN186665

Overview
NameCN186665
Unique NameCN186665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8101 contig Csv1_Contig8101:12..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.374e-79
Identity = 141/219 (64.38%), Postives = 171/219 (78.08%), Query Frame = 3
Query:   69 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 719
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+NK+ AY  TK
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETK 227          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.374e-79
Identity = 141/219 (64.38%), Postives = 171/219 (78.08%), Query Frame = 3
Query:   69 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 719
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+NK+ AY  TK
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETK 227          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 8.050e-73
Identity = 132/218 (60.55%), Postives = 166/218 (76.15%), Query Frame = 3
Query:   72 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 719
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++LQD+PAWYKEKVY    VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+ ADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L  +IEE+N+++AY  TK
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTK 226          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.052e-68
Identity = 123/219 (56.16%), Postives = 161/219 (73.52%), Query Frame = 3
Query:   69 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 719
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++LQD+PAWYK+KVY    VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+ ADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L  +I+E+NK++AY  TK
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTK 226          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 60/198 (30.30%), Postives = 96/198 (48.48%), Query Frame = 3
Query:  126 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHID----TFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNK 695
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P+  VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K+  EL S +      F      +      ++    F  LE+ L K     F     S +D    P+ ER +     E   D T   PKL  W+  + K
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLEALELNEC-IDHT---PKLKLWMAAMMK 208          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  126 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTND-VYTSFKGDPA---KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNK 695
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K+  ELFS + +     + +  K D A   ++    F  LE+ L       F     S +D    P+ ER +     E         PKL  W+  + +
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNE----CVDHTPKLKLWMAAMKE 208          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 62/202 (30.69%), Postives = 99/202 (49.01%), Query Frame = 3
Query:  126 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNK 695
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   VP LE+  G +I ES+   +Y+D  +    L PDDP ++   K+  ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +     E   D T   PKL  W+  + +
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLEALELNEC-IDHT---PKLKLWMATMQE 208          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 3
Query:  126 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNK 695
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P   VP LE++ G ++ ES+   +Y+D  +    L PDDP K+   K+  E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +     E K +  A  PKL  W+  + +
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLEAL---ELK-ECLAHTPKLKLWMAAMQQ 207          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 62/210 (29.52%), Postives = 97/210 (46.19%), Query Frame = 3
Query:  123 PPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKIADEL--FSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITA-------GRPKLAAWIEELNKLDAYKS 713
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++ +AD L   +H       V         KQ    F+ L++A +   +  +   Q    D    PF E+     S +   D+           PKL  W +++   D  +S
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQG-KAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRLTAVAHAVPLLFAVMRDRTLKDEKQR-KVFEVLKQAENLLANDFYAGSQPGYPDYLSFPFFEKIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISSDVVQS 223          
BLAST of CN186665 vs. ExPASy Swiss-Prot
Match: DHAR1_ARATH (Glutathione S-transferase DHAR1, mitochondrial OS=Arabidopsis thaliana GN=DHAR1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 52/185 (28.11%), Postives = 88/185 (47.57%), Query Frame = 3
Query:  168 CPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQ-FSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTK 719
            CPF+QRA +T   K L  KI L+  NL D+P W+ + + P  KVP L+ + K + +S  ++  ++  +  P  L    E   +   +F    TF     ++   + A       + LE  L K  DGPF  G+  S VD++  P +   Q+ L     + +    P +  +++ L  LD+++ TK
Sbjct:   20 CPFSQRALLTLEEKSLTYKIHLI--NLSDKPQWFLD-ISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPP-LKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLV--ELEALENHL-KSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTK 197          
The following BLAST results are available for this feature:
BLAST of CN186665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IN21B_ORYSJ3.374e-7964.38Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI3.374e-7964.38Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ8.050e-7360.55Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE2.052e-6856.16Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_PIG7.167e-1330.30Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_HUMAN1.223e-1228.79Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT2.085e-1230.69Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_MOUSE2.085e-1230.35Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_CAEEL3.557e-1229.52Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
DHAR1_ARATH2.306e-1128.11Glutathione S-transferase DHAR1, mitochondrial OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003E05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186665 ID=CN186665; Name=CN186665; organism=Citrus sinensis; type=EST; length=720bp
GCAGGCTTTCTTCTTCAAAGCAAAAGAAAAGCATTCAGGAAACCTCTAGA
GTCTTACCTTCCTCAATGGCCACCACAGCGCAAGAGAATCTTCCTCCACC
GTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGATGGAACTCCCAGGT
TGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGCGTGGATCACCAGG
AACTACAAGGGATTACAAGACAAGATTAAGTTAGTTCCACTGAACCTCCA
AGATAGGCCCGCTTGGTACAAGGAGAAGGTTTATCCTGCTAACAAGGTTC
CAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATCTCTTGATTTGATT
AAATATGTTGACAGCAATTTTGAAGGGCCTTCACTTTTACCTGATGATCC
TGAGAAACGAAAGATTGCTGATGAACTGTTTTCCCACATCGATACCTTCA
CCAACGATGTGTATACTTCATTCAAAGGAGACCCAGCAAAACAAGCTGGT
CCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAATTTGATGATGGCCC
GTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAGCCTATATTCCATTTG
TTGAGAGATTCCAGATCTTCTTATCAGAAGAATTTAAGTATGACATCACT
GCAGGCAGGCCTAAACTGGCAGCATGGATTGAGGAGTTGAACAAGCTCGA
TGCTTACAAGTCAACAAAAG
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