CN186651

Overview
NameCN186651
Unique NameCN186651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9833 contig Csv1_Contig9833:504..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.718e-74
Identity = 134/148 (90.54%), Postives = 145/148 (97.97%), Query Frame = -2
Query:  343 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPVAAA 786
            P KDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ+DID+QANEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRDFFMSA+EAK+YGLIDGVIMNP K LQP+AAA
Sbjct:  151 PTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 104/146 (71.23%), Postives = 122/146 (83.56%), Query Frame = -2
Query:  349 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPVA 786
            P KDI +Y+NSPGGSVTAGM IFDT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG  +DI++QA E+L+HK  LN YL+ HTGQ +E+I EDT+RDFFMS +EA+DYGLID VI       +PVA
Sbjct:   55 PEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAAGSRPVA 200          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.512e-54
Identity = 104/146 (71.23%), Postives = 121/146 (82.88%), Query Frame = -2
Query:  349 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPVA 786
            P KDI +Y+NSPGGSVTAGM IFDT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG  +DI++QA E+L+HK  LN YL+ HTGQ +E+I EDT+RDFFMS +EAKDYGLID VI       +PVA
Sbjct:   55 PEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHAAGSRPVA 200          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.024e-52
Identity = 98/135 (72.59%), Postives = 114/135 (84.44%), Query Frame = -2
Query:  382 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 786
            P KDI +Y+NSPGGSVTAGMAI+DT++HIRPDV T+C GLAASMGAFLLS GT GKR +LPN+RIMIHQPLGGAQG   DI++QA E+L+HK  LN  LS HTGQ +E+I  DT+RDFFMSAEEAK YGLID V+
Sbjct:   87 PEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQVV 221          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNY3 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.486e-51
Identity = 98/145 (67.59%), Postives = 119/145 (82.07%), Query Frame = -2
Query:  352 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPV 786
            P KDI +Y+NSPGGSV+AG+ IFDT+  IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG  +DI++QA E+L+ KA LN +L+ HTG++LE+I  DT+RDFFMSAEE+K+YGLID VI        P+
Sbjct:   54 PEKDIYLYINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVINRRPSASDPI 198          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.014e-50
Identity = 96/147 (65.31%), Postives = 121/147 (82.31%), Query Frame = -2
Query:  346 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPVAA 786
            P KDI  Y+NSPGG VTAGMA++DT+++I+PDV+TVC+G AASMGA LL+AG KGKR+SLPNSRIMIHQPLGGAQG  SDI +QANE+L  K  L+G LS HTGQ  +KI+EDTDRDFFMS ++AK+YGL+D V+ +  ++ +  AA
Sbjct:   56 PEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDELEKAEAA 202          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.730e-50
Identity = 99/148 (66.89%), Postives = 121/148 (81.76%), Query Frame = -2
Query:  343 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNPHKILQPVAAA 786
            P KDI +Y+NSPGGSV AGMAI+DT++HI+PDVST+C+GLAASMGAFLL+ GTKGKR +LP++RIMIHQPLGGAQG  +DI++QA E+L  K +LN  L+YHTGQ LE+I  DTDRD FM+ E+AK+YGLID VI    K  QP  AA
Sbjct:   54 PEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI---SKRPQPTLAA 198          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_ANAVT (ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.259e-50
Identity = 100/133 (75.19%), Postives = 114/133 (85.71%), Query Frame = -2
Query:  382 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 780
            KDI +Y+NSPGGSV AGMAI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG   DI++QA E+L+ KA LN  L+ HTGQ LE+I  DTDRDFFMSAEEAK+YGLID VI
Sbjct:   66 KDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 198          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP2_ANASP (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.259e-50
Identity = 100/133 (75.19%), Postives = 114/133 (85.71%), Query Frame = -2
Query:  382 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVI 780
            KDI +Y+NSPGGSV AGMAI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG   DI++QA E+L+ KA LN  L+ HTGQ LE+I  DTDRDFFMSAEEAK+YGLID VI
Sbjct:   84 KDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 216          
BLAST of CN186651 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.951e-50
Identity = 95/138 (68.84%), Postives = 114/138 (82.61%), Query Frame = -2
Query:  373 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVIMNP 786
            P KDI +Y+NSPGGSVTAGMAI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG   DI++QA E+L+HK+ LN  L+ HTGQ LEKI  DTDRDFFMS EEAK YGLID V+  P
Sbjct:   90 PEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227          
The following BLAST results are available for this feature:
BLAST of CN186651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP5_ARATH1.718e-7490.54ATP-dependent Clp protease proteolytic subunit 5, ... [more]
CLPP1_ANAVT8.864e-5571.23ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_ANASP1.512e-5471.23ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_THEEB7.024e-5272.59ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_SYNY33.486e-5167.59ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_DESAH1.014e-5065.31ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_SYNJB1.730e-5066.89ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANAVT2.259e-5075.19ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_ANASP2.259e-5075.19ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNP62.951e-5068.84ATP-dependent Clp protease proteolytic subunit 3 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003D22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186651 ID=CN186651; Name=CN186651; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTCATATGAAGCTTGTGTCGCCATTTCTTCATATGGTCC
CTACAACATCAAAATGGATTATATTGAGAAAATGTAATTCCATGCAATAC
ATGAATCCTAAAACTGAAATTTCCCACAATGGTTGATAATTTTGGCTTTC
CTACGGTTTTAAAAAAGCATTCAATCACCAATCTGTACATGAAACAGGCA
GTAGAGGTTTCCTGATCATTGTGTTTTAACTTTCCAACTGGACTATGTAT
CTGATAGAAATGCTAAAACTAAAACCTTTGGATGGGAAAGCTACGGTTAC
AAAGTTAAGTTGACGCACTTGGCTTGATTTTCACTGACCAGCAGCAGCTG
CTACTGGCTGCAGAATCTTGTGAGGATTCATGATGACACCATCTATAAGA
CCGTAGTCTTTAGCTTCTTCTGCACTCATGAAGAAATCGCGATCGGTGTC
CTCGTTGATCTTCTCAAGGGTTTGACCAGTATGGTAAGACAGATACCCAT
TCAAATTTGCCTTGTGATGGAGCATCTCATTTGCCTGGAGATCAATATCA
CTTTGCCCTCCTTGTGCCCCACCAAGAGGCTGATGGATCATTATCCTTGA
GTTTGGAAGACTGTATCTTTTCCCTTTGGTGCCAGCACTAAGCAGAAAAG
CCCCCATACTGGCTGCCAGTCCAACACATACAGTGGAAACATCCGGTCGT
ATGTGCCTGATTGTATCAAAAATGGCCATACCAGCCGTCACTGATCCTCC
AGGAGAGTTCAGATACATGATAATATCCTTGTTTGGA
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