CN186650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: DAPB2_ARATH (Dihydrodipicolinate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=DAPB2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.202e-26 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = -2 Query: 549 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 680 PG F+GY L+V+ESHQA KLD SGTAKAVIS FQKL VS+DMDQ Sbjct: 218 PGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQ 261 HSP 2 Score: 68.1662 bits (165), Expect = 3.202e-26 Identity = 31/38 (81.58%), Postives = 37/38 (97.37%), Query Frame = -3 Query: 434 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCI 547 VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++SKA+K I Sbjct: 299 VSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRSKAEKRI 336
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: DAPB1_ARATH (Dihydrodipicolinate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=DAPB1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.434e-25 Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = -2 Query: 549 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 680 PG FSGY L V+ESHQA KLD SGTAKAVIS FQ+L VS+DMDQ Sbjct: 216 PGAFSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMDQ 259 HSP 2 Score: 65.855 bits (159), Expect = 3.434e-25 Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = -3 Query: 434 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCI 547 VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++ KAD+ I Sbjct: 297 VSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRLKADQRI 334
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: DAPB1_ORYSJ (Probable dihydrodipicolinate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.372e-23 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = -2 Query: 549 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 680 PG FSGY L+V+ESHQA KLD SGTAKAVIS FQKL VSF++++ Sbjct: 212 PGAFSGYKLEVMESHQATKLDISGTAKAVISCFQKLGVSFNLNE 255 HSP 2 Score: 64.6994 bits (156), Expect = 1.372e-23 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = -3 Query: 440 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADK 547 VSF+FQHNVCGRSIYAEGTVDA LFL KK+QS A+K Sbjct: 293 VSFEFQHNVCGRSIYAEGTVDAALFLHKKIQSGANK 328
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: DAPB2_ORYSJ (Probable dihydrodipicolinate reductase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.670e-23 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = -2 Query: 549 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 680 PG FSGY L+VLESHQAGKLD SGTAKAVI+ F+KL VS+DM++ Sbjct: 194 PGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMNR 237 HSP 2 Score: 58.5362 bits (140), Expect = 6.670e-23 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = -3 Query: 434 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCI 547 VSF+FQHNVCGRSIYAEG+VDA +FL +KV+S K I Sbjct: 275 VSFEFQHNVCGRSIYAEGSVDAAMFLHRKVRSNDSKRI 312
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_RAT (Aspartyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Dars PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 GID++ I YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P Sbjct: 446 GIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_PONAB (Aspartyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=DARS PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 GID++ I YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P Sbjct: 446 GIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_MOUSE (Aspartyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Dars PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 GID++ I YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P Sbjct: 446 GIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_HUMAN (Aspartyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=DARS PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 GID++ I YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P Sbjct: 446 GIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_BOVIN (Aspartyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=DARS PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 13 GIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 GID++ I YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P Sbjct: 446 GIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501
BLAST of CN186650 vs. ExPASy Swiss-Prot
Match: SYDC_CAEEL (Aspartyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=drs-1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1 Query: 16 IDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 180 +D+ I +YIDSF+YG PPH G G+GLERV MLF GL+NIR SL+PRDP R+ P Sbjct: 477 VDLAKIQSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLTP 531 The following BLAST results are available for this feature:
BLAST of CN186650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186650 ID=CN186650; Name=CN186650; organism=Citrus sinensis; type=EST; length=804bpback to top |