CN186614

Overview
NameCN186614
Unique NameCN186614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 7.191e-32
Identity = 71/125 (56.80%), Postives = 77/125 (61.60%), Query Frame = -3
Query:  261 DPPPEGRLPNAPKGFAHLGDVFGPMGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 635
            +PPPEGRLP A KG  HL DVFG MGL+DK+IV  SGGHTL             WT NPL F NSYFKE+LSGEKEGL  +P+DK    DP F P VEK              AHLKLSELGF D
Sbjct:  125 EPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 73/125 (58.40%), Postives = 78/125 (62.40%), Query Frame = -3
Query:  261 PPPEGRLPNAPKGFAHLGDVFGP-MGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 632
            PPPEGRLP+A KG  HL  VFG  MGLSD++IV  SGGHTL            PWT NPL F NSYF ELLSG+KEGL  +PSDK    DP FCPLVEK              AHLKLSELGF D
Sbjct:  125 PPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFAD 249          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30
Identity = 72/125 (57.60%), Postives = 77/125 (61.60%), Query Frame = -3
Query:  261 PPPEGRLPNAPKGFAHLGDVFGP-MGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 632
            PPPEGRLP+A KG  HL  VFG  MGLSD++IV  SGGHTL            PWT NPL F NSYF ELLSG+KEGL  +PSDK    DP F PLVEK              AHLKLSELGF D
Sbjct:  125 PPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFAD 249          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.558e-29
Identity = 69/126 (54.76%), Postives = 77/126 (61.11%), Query Frame = -3
Query:  261 DPPPEGRLPNAPKGFAHLGDVFGP-MGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 635
            +PPPEGRLP+A +G  HL  VF   MGLSDK+IV  SGGHTL             WT+NPL F NSYF EL+SGEKEGL  +PSDK    DP F PLVEK              AHLKLSELGF +
Sbjct:  125 EPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.558e-29
Identity = 71/125 (56.80%), Postives = 76/125 (60.80%), Query Frame = -3
Query:  261 PPPEGRLPNAPKGFAHLGDVFGP-MGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 632
            PPPEGRLP+A KG  HL DVF   MGLSDK+IV  SG HTL             WT+NPL F NSYFKELLSGEKEGL  + SDK    DP F PLVEK              AH+KLSELGF D
Sbjct:  125 PPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFAD 249          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28
Identity = 69/126 (54.76%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  261 DPPPEGRLPNAPKGFAHLGDVFGP-MGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGFGD 635
            +PPPEGRLP+A KG  HL DVFG  MGLSD++IV  SGGHT+            PWT+NPL F NSYF ELL+GEK+GL  +PSDK    D  F PLVEK              AHLKLSELGF +
Sbjct:  124 EPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAE 249          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24
Identity = 63/121 (52.07%), Postives = 69/121 (57.02%), Query Frame = -3
Query:  267 PPEGRLPNAPKGFAHLGDVFGPMGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGF 629
            P EGRLP+A +GF HL DVF  MGLSDK+IV  SGGHTL            PWT  PL F NSYF ELL GE EGL  +P+DK    DP F  LVE               +H KLSELGF
Sbjct:  124 PKEGRLPDAKQGFQHLRDVFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23
Identity = 59/121 (48.76%), Postives = 66/121 (54.55%), Query Frame = -3
Query:  267 PPEGRLPNAPKGFAHLGDVFGPMGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGF 629
            P EGRLP+A KG  HL D+F  MGLSDK+IV  SGGHTL             WT  PL F NSYF ELL GE EGL  +P+DK    DP F   V+               +H KLSELGF
Sbjct:  124 PREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.775e-22
Identity = 60/123 (48.78%), Postives = 67/123 (54.47%), Query Frame = -3
Query:  267 DPPPEGRLPNAPKGFAHLGDVFGPMGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGF 635
            D P EGRLP+A KG AHL +VF  MGLSDK+IV  SGGHTL             WT +PL F NSYF ELL    EGL  +P+DK    DP F   VE               +H KLSELGF
Sbjct:  123 DSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CN186614 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.775e-22
Identity = 60/123 (48.78%), Postives = 67/123 (54.47%), Query Frame = -3
Query:  267 DPPPEGRLPNAPKGFAHLGDVFGPMGLSDKEIVVFSGGHTLXXXXXXXXXXXXPWTNNPLFFANSYFKELLSGEKEGLF*VPSDKVFFGDPGFCPLVEKXXXXXXXXXXXXXXAHLKLSELGF 635
            D P EGRLP+A KG AHL +VF  MGLSDK+IV  SGGHTL             WT +PL F NSYF ELL    EGL  +P+DK    DP F   VE               +H KLSELGF
Sbjct:  123 DSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of CN186614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
APX2_ARATH7.191e-3256.80L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX1_ORYSI3.569e-3158.40L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSJ8.790e-3057.60L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ2.558e-2954.76L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ARATH2.558e-2956.80L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX1_PEA1.269e-2854.76L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX3_ARATH1.897e-2452.07L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ4.672e-2348.76Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ1.775e-2248.78Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI1.775e-2248.78Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186614 ID=CN186614; Name=CN186614; organism=Citrus sinensis; type=EST; length=637bp
TTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTAACAAAAAGTTTTGCAA
ATTATTTCCCGTCACAAAACTAGAACATTGTTTTTGACACACACCCAGCA
ACCCAGCAAACGCCCATGGGGCAGCTTTTGCCATTTTGATTACCTCCCAT
CAACCAATTTAAAAACAAGGGCATGACCAAAAATTTGAAACTTTAAAAGC
CCCAAAAAAGTACATGGATAGCCCCATTCAGCTGCTTCAAAATTTGATTC
ATTACCCACCATCCCCAAATCCGAGTTCTGAGAGCTTCAAATGAGCTTCA
GCGTAATCTGCAAAAAAGGCATCCCCATCTGCAGCATATTTTTCAACAAG
AGGACAAAACCCTGGGTCCCCAAAAAAAACCTTGTCTGAAGGCACCTAAA
ATAAACCTTCTTTCTCCCCACTCAGCAATTCCTTAAAATATGAATTGGCA
AAAAAAAGGGGATTGTTAGTCCAGGGGCCTTCAAATCCAGAACCCTCCTT
GGGGCCCCCACCCAATGTATGACCCCCGGAAAAAACAACGATTTCCTTAT
CACTCAAACCCATGGGGCCAAAAACATCTCCCAAATGGGCAAAACCTTTG
GGGGCATTTGGCAAGCGACCTTCTGGGGGCGGATCAA
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