CN186595

Overview
NameCN186595
Unique NameCN186595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186595 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.024e-60
Identity = 111/182 (60.99%), Postives = 143/182 (78.57%), Query Frame = 1 
Query:  232 MGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 777
            MGYAMSRFE +     ++ + ++ S+  S   KP+  LDHEIAQLT+L+S P E+ S+++  KR LP+ST+KMLAGRE N SGRGRFS+ADCCH++SR+LPVN P  VDQ TSR Y+SQFS DGSLF+AGFQ   IRIY+V++GWK+Q DI+AK +RWT+TD SLSPDQ+ L YAS++PI H
Sbjct:    1 MGYAMSRFETDVSVIFSSSSDSETSHD-SLINKPVKNLDHEIAQLTRLRSAPHENLSRDLLVKRVLPLSTMKMLAGREANVSGRGRFSSADCCHVVSRHLPVNDPCVVDQMTSRVYLSQFSTDGSLFIAGFQGCHIRIYNVDKGWKVQNDIIAKCVRWTITDASLSPDQKFLAYASLTPIAH 181
[Close]
BLAST of CN186595 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.767e-58
Identity = 110/177 (62.15%), Postives = 139/177 (78.53%), Query Frame = 1 
Query:  247 SRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 777
            +RF  ++   D+ + V  + +S+    +  +  DHEIAQLTK +S P +  S+++PGK  L VST+KML GRE N+SGRGRFS+AD CH+LSRYLP+NGPW VDQ+TS AYVSQFS DG  FVAGFQ   IRIY+V++GWK+QKDIL KSLRWT+TDTSLSPDQR+LVYASM+PIV+
Sbjct:    5 TRFGKDNSACDSGNAVEGSGSSKGP-NEVSNDFDHEIAQLTKHRSRPHQLLSQDMPGKSRLLVSTMKMLVGRESNHSGRGRFSSADGCHVLSRYLPINGPWGVDQSTSPAYVSQFSNDGLFFVAGFQGGHIRIYNVDKGWKVQKDILTKSLRWTITDTSLSPDQRYLVYASMTPIVN 180
The following BLAST results are available for this feature:
BLAST of CN186595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LE14B_LITER4.024e-6060.99LEC14B protein OS=Lithospermum erythrorhizon PE=2 ... [more]
LE14B_PRUAR3.767e-5862.15LEC14B homolog OS=Prunus armeniaca PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186595 ID=CN186595; Name=CN186595; organism=Citrus sinensis; type=EST; length=777bp
CGGTCGGTTCAGTGGCCAAAACAAACAGCAATTAAATTAAACTAAATTAA
ATAAATTAATGAAAGGCAGAAGCAATCATCACCGCGAATAATAATACCAG
TGTGTTTATCTGCTATTATCCGTTGACAAAAAAACGTTGCCGAATCTGAG
GATTCTAAATTTGGCAATAGGATTATGAAGGATGAAGAGGCTCTAAGAAG
CTGTATAGCAAGTGGAGTTGACTTTGACGAAATGGGATATGCCATGAGTA
GATTCGAGATAGAATCTGAATTCTATGATGCTGCCGATACTGTCAATCAA
GCTAGTAATAGTCGTAGCAAATTCAAGAAACCCTTGAGTGCTTTAGACCA
TGAAATTGCCCAGCTCACGAAGCTGAAATCGGAACCCAAGGAGCATTTTA
GCAAAGAAGTACCTGGGAAGCGGCACTTGCCTGTTTCCACTGTGAAAATG
TTGGCTGGTAGGGAAGGCAATTATTCAGGAAGAGGGAGGTTCTCAGCTGC
AGATTGTTGTCATATGCTTAGTAGATATTTGCCTGTTAATGGGCCCTGGC
CTGTGGACCAGACAACTAGCCGAGCATATGTCTCTCAGTTTTCGGCTGAT
GGTTCTTTATTTGTTGCTGGATTTCAGGCTAGTCAAATTAGAATCTATGA
TGTGGAGAGAGGTTGGAAAATACAGAAAGACATTCTTGCTAAAAGTTTGC
GTTGGACAGTCACAGATACATCTCTTTCCCCGGATCAGCGCCATCTTGTT
TATGCAAGCATGTCACCTATAGTGCAC
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