CN186594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.799e-70 Identity = 122/169 (72.19%), Postives = 143/169 (84.62%), Query Frame = -3 Query: 239 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRR 745 GITFIDSRGDGRY ISNGKDQ IKLWDIRKMSSNA + R+ EWDYRWM+YP +ARDLKHP D S ATYKGHSVL TLIRC+FSP YSTGQKYIYTGSHD+ VY+YDLV+G+QV+ L+YH + VRDCSWHP+ PMLVSSS+DG++V+WE+ GN EA N +R++R Sbjct: 305 GITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNAGGTIQSRNSEWDYRWMEYPQEARDLKHPSDLSGATYKGHSVLCTLIRCYFSPDYSTGQKYIYTGSHDANVYIYDLVTGDQVSTLQYHKATVRDCSWHPNYPMLVSSSFDGEIVKWEYRGNDEAPVQGNNQRLQR 473
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.560e-69 Identity = 117/171 (68.42%), Postives = 136/171 (79.53%), Query Frame = -3 Query: 233 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRRRQ 745 G+TFIDSRGDGRY ISNGKDQ +LWDIRKMSS A + R ++WDYRWM+YP A+ LKHP DQS+ATY+GH VLRTLIRC+ SP YSTGQKYIYTGS D CVY+YDLV+G QVA L +H PVRDCSWHP PMLVSSSWDG + RWEFPG+ + P L + R RR++ Sbjct: 303 GVTFIDSRGDGRYFISNGKDQTTQLWDIRKMSSRAMYSPRLRDHDWDYRWMEYPAHAKTLKHPNDQSLATYRGHGVLRTLIRCYLSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGD-DQVPTLERPRARRKE 472
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_PONAB (DDB1- and CUL4-associated factor 11 OS=Pongo abelii GN=DCAF11 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43 Identity = 86/156 (55.13%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 290 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS---YEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 745 GITFIDS+GD RYLISN KDQ IKLWDIR+ SS ++ WDYRW P +A R LK P D S+ TY+GH VL TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 357 GITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_HUMAN (DDB1- and CUL4-associated factor 11 OS=Homo sapiens GN=DCAF11 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43 Identity = 86/156 (55.13%), Postives = 106/156 (67.95%), Query Frame = -3 Query: 290 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS---YEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 745 GITFIDS+GD RYLISN KDQ IKLWDIR+ SS ++ WDYRW P +A R LK P D S+ TY+GH VL TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 357 GITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_BOVIN (DDB1- and CUL4-associated factor 11 OS=Bos taurus GN=DCAF11 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.177e-43 Identity = 86/156 (55.13%), Postives = 105/156 (67.31%), Query Frame = -3 Query: 290 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS---YEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 745 GITFIDS+GD RYLISN KDQ IKLWDIR+ SS ++ WDYRW P +A R LK P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 357 GITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_RAT (DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus GN=Dcaf11 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.455e-43 Identity = 86/156 (55.13%), Postives = 104/156 (66.67%), Query Frame = -3 Query: 290 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA---SCNLGFRSYEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 745 GITFIDS+GD RYLISN KDQ IKLWDIR+ SS + L WDYRW P +A + LK P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG + W++ Sbjct: 357 GITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY 512
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_MOUSE (DDB1- and CUL4-associated factor 11 OS=Mus musculus GN=Dcaf11 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.215e-42 Identity = 86/156 (55.13%), Postives = 104/156 (66.67%), Query Frame = -3 Query: 290 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA---SCNLGFRSYEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 745 GITFIDS+GD RYLISN KDQ IKLWDIR+ SS + L WDYRW P A + LK P D S+ TY+GH VL TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 357 GITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKIAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_CAEEL (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis elegans GN=wdr-23 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.468e-35 Identity = 82/167 (49.10%), Postives = 103/167 (61.68%), Query Frame = -3 Query: 266 GITFIDSRGDGRYLISNGKDQAIKLWDIRK---MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC--DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 745 G+T +DSR D RYL+SN KDQ IK+WD+RK MS + +S WDYRW PP L P D SV T +GHSVL TL+R +FSP STG++YIYTG V VYD++SG LK HT+ VR+C WHP++ +VSS+WDG V W+ G AP Sbjct: 361 GVTHVDSRQDERYLLSNSKDQTIKVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPP---GLCQPVAGDTSVMTLRGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTVSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAP 523
BLAST of CN186594 vs. ExPASy Swiss-Prot
Match: DCA11_CAEBR (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis briggsae GN=wdr-23 PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33 Identity = 77/167 (46.11%), Postives = 99/167 (59.28%), Query Frame = -3 Query: 266 GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG---FRSYEWDYRWMDYPPQARDLKHPC--DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 745 G+T++DSR D RYL+SN KDQ IK+WD+RK S +S WDYRW PP L P D SV T +GHSVL TL+R FSP +TG+++IYTG + VYD+V+G LK H + VR+C WHP + +VS+SWDG V W+ G AP Sbjct: 340 GVTYVDSRQDERYLLSNSKDQTIKVWDLRKFSCQGGVEATRACVQSQHWDYRWQPAPP---GLCQPVQGDTSVMTLRGHSVLHTLVRAKFSPE-NTGRRFIYTGCARGEIVVYDIVTGTVSRRLKGHQAVVRECDWHPQENEIVSTSWDGVTTVWTWDERAEGVIAP 502 The following BLAST results are available for this feature:
BLAST of CN186594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186594 ID=CN186594; Name=CN186594; organism=Citrus sinensis; type=EST; length=747bpback to top |