CN186582

Overview
NameCN186582
Unique NameCN186582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.178e-61
Identity = 121/182 (66.48%), Postives = 135/182 (74.18%), Query Frame = 3
Query:  204 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            ++L   A  D N+ PLTGVVF+PFEEVKKE            ARQKY D+CEA INEQINVEYNVSYVYHA++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+LHSVA +NND Q+A F+ESEFLGEQVE
Sbjct:   39 KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVE 220          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.701e-60
Identity = 117/177 (66.10%), Postives = 132/177 (74.58%), Query Frame = 3
Query:  219 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            S+ VD N+MP+TGVVFQPFEEVKK             ARQ+Y D  EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GL                  MEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+LH VA  NNDPQ+A FVESEFLGEQ+E
Sbjct:   48 SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIE 224          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.789e-60
Identity = 118/183 (64.48%), Postives = 137/183 (74.86%), Query Frame = 3
Query:  204 RSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            R++ V+AA VD N+MP+TGVVFQPFEEVKK             ARQ++ D  EA INEQINVEYNVSYVYH++YAYFDRDN+A++GL                  MEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++H VA  NNDPQ+A FVESEFLGEQ+E
Sbjct:   43 RAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIE 225          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.332e-59
Identity = 116/180 (64.44%), Postives = 133/180 (73.89%), Query Frame = 3
Query:  210 LKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            L V A+  +N+ PLTGVVF+PFEEVKKE            AR KY D+CEAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+LH+VA RNND Q+A FVES++L EQVE
Sbjct:   44 LVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVE 223          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.079e-58
Identity = 118/204 (57.84%), Postives = 141/204 (69.12%), Query Frame = 3
Query:  138 SSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            S C + S ++ V  G       R+++V AA      PLTGV+F+PF+E+KK+            +RQ Y DE EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL +HSVADRNND Q+A F+ESEFL EQVE
Sbjct:   27 SLCSSSSLSASVNGG-----GSRNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVE 225          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.715e-58
Identity = 112/174 (64.37%), Postives = 129/174 (74.14%), Query Frame = 3
Query:  228 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA F+ESEFL EQVE
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVE 220          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 224.942 bits (572), Expect = 3.546e-58
Identity = 112/174 (64.37%), Postives = 128/174 (73.56%), Query Frame = 3
Query:  228 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            V A+++PLTGV+F+PFEEVKK             ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKLL++HSVADRNNDPQMA F+ESEFL EQVE
Sbjct:   47 VCASTVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVE 220          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.631e-58
Identity = 118/177 (66.67%), Postives = 129/177 (72.88%), Query Frame = 3
Query:  219 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            +A    N   LTGV+F+PFEEVKKE            ARQKY DE EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL LHSVA +N D Q+A FVESEFLGEQVE
Sbjct:   38 AAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVE 214          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.298e-57
Identity = 111/174 (63.79%), Postives = 127/174 (72.99%), Query Frame = 3
Query:  228 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            V A+++PLTGV+F+PFEEVKKE            ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKL S+HSVADRN DPQ+A F+ESEFL EQVE
Sbjct:   46 VSASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVE 219          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.298e-57
Identity = 122/201 (60.70%), Postives = 141/201 (70.15%), Query Frame = 3
Query:  156 STASLVKLGCISPRT--KRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            S+ SL       PR+   R L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+LHSVA +N D Q+A FVE+E+LGEQVE
Sbjct:   11 SSLSLFSPNAEPPRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVE 211          
The following BLAST results are available for this feature:
BLAST of CN186582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI3_SOYBN1.178e-6166.48Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_BRANA1.701e-6066.10Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI1_ARATH3.789e-6064.48Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_TOBAC9.332e-5964.44Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_VIGUN2.079e-5857.84Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_MALXI2.715e-5864.37Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN3.546e-5864.37Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI2_VIGUN4.631e-5866.67Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI_PHAVU2.298e-5763.79Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI4_SOYBN2.298e-5760.70Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186582 ID=CN186582; Name=CN186582; organism=Citrus sinensis; type=EST; length=749bp
AGTGGCCATTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCC
ATTACGCACTTGCTTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTC
TCTTGCAGCGAAGCAACTGGCTGGTCTTATAACAAGCTCATCATGTTACA
CTAAGTCTACTGCTTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACG
AAGAGGAGTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCT
GACCGGGGTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTG
ATGTTCCTGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGAC
GAGTGTGAGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTC
ATACGTGTACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTC
TGAGAGGCCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAA
CATGCTGAGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAA
ACTGCACTCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAG
GGGATGCCTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACA
AACGAGAAGCTTCTGAGCCTGCACAGTGTGGCGGATAGAAACAATGATCC
CCAAATGGCAAAGTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAA
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