CN186571

Overview
NameCN186571
Unique NameCN186571
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1895 contig Csv1_Contig1895:253..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN186571 vs. ExPASy Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 64/165 (38.79%), Postives = 71/165 (43.03%), Query Frame = -1 
Query:  122 VCDKAFSSYQALGGHKASHR--KGSGGGDEHXXXXXXXXXXXXXXTGV-----------PNATGRTHECSICHKSFPTGQALGGHKRCHYDGG-----------EKXXXXXXXXXXXXXXXXHRDFDLNLPVLPEL------SPAFFFSGDDEVESPLPAKKPRL 526
            VC K+FSSYQALGGHK SHR  + S   D                                AT R H CSIC K FPTGQALGGHKR HYDGG                              R FDLN+P +PE            +  D+EV+SPL  KKPRL
Sbjct:   94 VCGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVGAAASSTELLAAAAAESEVGSTGNGSSAARAFDLNIPAVPEFVWRPCAKGKMMWEDDEEVQSPLAFKKPRL 258
The following BLAST results are available for this feature:
BLAST of CN186571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZFP1_WHEAT1.641e-1938.79Zinc finger protein 1 OS=Triticum aestivum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186571 ID=CN186571; Name=CN186571; organism=Citrus sinensis; type=EST; length=688bp
TTTTTTTTTTGTAAGAAAACACGAAATATATTTGCCTAAACTTAACATCC
CCTTTAGTGGCCCAAAAACAAAAAAAAAGTGGCAATTAAGTACCTTAAAC
TTCGATTTTGGGGGGCAAGAAGAGACGCGGCTTCTTCGCCGGCAGTGGAC
TCTCCACCTCGTCATCCCCAGAGAAGAAGAAAGCAGGGGAGAGCTCCGGT
AAGACAGGGAGGTTGAGGTCAAAGTCACGGTGGCTGACTTGGCTGTGAGT
GCTACTGGACCCGGATGACGTCACTCCGCTCTTCTCGCCGCCATCGTAGT
GACAACGTTTGTGTCCGCCCAAGGCTTGGCCGGTGGGGAAGGACTTGTGA
CAGATGGAACACTCGTGGGTCCTACCAGTGGCGTTCGGTACGCCGGTGGT
CGTGGCGGTTGCGTTGGTGTTGGTGGTAGTGGAAGCGGAGTGTTCGTCGC
CGCCCCCAGATCCCTTACGGTGGCTGGCCTTGTGACCACCCAAGGCTTGG
TAAGAAGAAAACGCCTTGTCGCACACCTGCACTTGAAGACAAGCTTCTGG
TCAGAGGACGACGTCGTTGCAGCAGTAGATGGAGCACGAGACTTCTGTCG
CTGTGAGGCGGTGGTGGTCGTGTTGCATTTAGTTAAGGCGGCGGTGGAGG
TTGTGCCACGTGCAAGCATGACGAGGCAGAGCGCGAGA
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