CN186533

Overview
NameCN186533
Unique NameCN186533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12524 contig Csv1_Contig12524:23..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.202e-89
Identity = 158/204 (77.45%), Postives = 174/204 (85.29%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCDWYCVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            DLCNP+DKKVLL+ KKA  +PYVLASW   TDCCDWYCVTCD +TNRINSLTIFAG + GQIP+ VGDLPYLETL FHK P+LTGPIQPAIAKLK LK+LR+SWTN+SG VPDF+SQL NLTFL+LSFNNL+G IPSSLS+L  LGAL LDRNKLTG IP SFG F G+ PDLYLSHNQLSG IP S   MDF +IDLSRNKLE
Sbjct:   25 DLCNPDDKKVLLQIKKAFGDPYVLASWKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLE 228          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.423e-84
Identity = 149/202 (73.76%), Postives = 168/202 (83.17%), Query Frame = 2
Query:   98 CNPNDKKVLLKFKKALNNPYVLASWNPKTDCCDWYCVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            CNP DKKVLL+ KKAL+NPY+LASWNP TDCC WYCV CDL+T+RINSLTIF+G L GQIP  VGDLP+LETL+F KL +LTG I PAIAKLK+LK +R+SWTN+SGPVP F S+L NLT+L+LSFNNLSG IP SLS L  LGALHLDRN LTG IP+SFG F GSTP L+LSHNQLSGKIP S    D N +DLSRNKLE
Sbjct:   30 CNPKDKKVLLQIKKALDNPYILASWNPNTDCCGWYCVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTPGLHLSHNQLSGKIPYSFRGFDPNVMDLSRNKLE 231          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.890e-83
Identity = 148/206 (71.84%), Postives = 174/206 (84.47%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCDWYCVTCDLST--NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            DLCN NDK  LLK KK+LNNPY LASW+P+TDCC WYC+ C  +T  +R+ +LTIF+G + GQIP+EVGDLPYLETL+F KL +LTG IQP IAKLKNL+ LR+SWTN++GP+PDFISQL NL FLELSFN+LSG+IPSSLS L K+ AL L RNKLTGSIPESFG+F G+ PDL LSHNQLSG IP SLG++DFN IDLSRNKL+
Sbjct:   23 DLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCCSWYCLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKSLGNIDFNRIDLSRNKLQ 228          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 5.790e-76
Identity = 138/206 (66.99%), Postives = 166/206 (80.58%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCDWYCVTCDLST--NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            DLC+ +DK  LLK KK+LNNPY LASW+PKTDCC WYC+ C  +T  +R+ SL I  G++ GQIP EVGDLPYL +L+F KL +LTG IQP IAKLKNL  LR+SWTN++GPVP+F+SQL NL +++LSFN+LSG+IPSSLS L+KL  L L RNKLTG IPESFGTF+G  P L+LSHNQLSG IP SLG+ DF  IDLSRNKL+
Sbjct:   23 DLCHKDDKTTLLKIKKSLNNPYHLASWDPKTDCCSWYCLECGDATVNHRVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQ 228          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.941e-47
Identity = 97/210 (46.19%), Postives = 137/210 (65.24%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCD--WYCVTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            +LCNP DK+ LL+ KK L NP  L+SW P TDCC+  W  V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  LG +  D N+++G+IP+S+G+F+     + +S N+L+GKIP +  +++   +DLSRN LE
Sbjct:   30 ELCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSYGSFSKLFTAMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE 239          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.146e-46
Identity = 96/210 (45.71%), Postives = 136/210 (64.76%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCD--WYCVTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            +LCNP DK+ LL+ KK L NP  L+SW P TDCC+  W  V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  L  +  D N+++G+IP+S+G+F+     + +S N+L+GKIP +  +++   +DLSRN LE
Sbjct:   30 ELCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE 239          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris GN=PGIP3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.803e-46
Identity = 95/210 (45.24%), Postives = 136/210 (64.76%), Query Frame = 2
Query:   92 DLCNPNDKKVLLKFKKALNNPYVLASWNPKTDCCD--WYCVTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            +LCNP DK+ LL+ KK L NP  L+SW P TDCC+  W  V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  L  +  D N+++G+IP+S+G+F+     + +S N+L+GKIP +  +++   +DLSRN L+
Sbjct:   30 ELCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLQ 239          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 89/203 (43.84%), Postives = 126/203 (62.07%), Query Frame = 2
Query:   98 CNPNDKKVLLKFKKALNNPYVLASWN-PKTDCCDWYCVTCDLSTNRINSLTI-FAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKL 700
            C P+DK+ L++ K++L NP  L++W+    DCC+W  V CD    R+N++ I  A D+ GQIPS V  L  L +L   +LP L+GPI   +  L NL+ L IS TN+SG +PD ++++ +L  ++LS N+L+G IP+S S L  L +L L  NKLTG IP   G   G    L LS+NQL+G IP      + NT+DLS N+L
Sbjct:   27 CPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCD-EAGRVNNVFIDGANDVRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPA--GLVQGQFRSLILSYNQLTGPIPRDDAQDEINTVDLSHNRL 226          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 73/219 (33.33%), Postives = 116/219 (52.97%), Query Frame = 2
Query:   98 CNPNDKKVLLKFKKALNNPY--VLASWNPKTDCC-DWYCVTCDLSTNRINSLTIF-------------AGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMD-FNTIDLSRNKLE 703
            C+P D+  L  FK +L+ P   +  +W+  TDCC +WY ++CD  + R+  +++              +G + G I   V DL  L +L+      +TG I P I  L +L+ L ++   I+G +P  I +L+ L  L L+ N +SG IP+SL+ L +L  L L  N +TG IP  FG+       + L  N+L+G IP S+  M+    +DLS+N +E
Sbjct:   27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLK-MLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIE 244          

HSP 2 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  233 INSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDF-NTIDLSRNKL 700
            +  L +    + G IP++ G L  L  ++  +   LTG I  +I+ ++ L  L +S  +I GP+P+++  +  L+ L L  N+L+G IP SL     L   +L RN L G+IP+ FG+ T     L LSHN LSG+IP SL S  F   +D+S NKL
Sbjct:  185 LKHLELTENGITGVIPADFGSLKMLSRVLLGR-NELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKT-YLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKL 339          

HSP 3 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 2
Query:  230 RINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 580
            R+  L +    + G IP  +G++  L  L      SLTGPI  ++     L    +S   + G +PD     T L  L+LS N+LSG IP SLS  + +G L +  NKL G IP  F
Sbjct:  232 RLADLDLSKNHIEGPIPEWMGNMKVLSLLNLD-CNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGF 347          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 73/187 (39.04%), Postives = 104/187 (55.61%), Query Frame = 2
Query:  107 NDKKVLLKFKKALNNPYVLASWNPKTDC-CDWYCVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPS--LTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLG 658
            +D + LL  K+   +P + +SW+P+    C WY +TC  + NR+ S++I    L     S + DL  L +L F  L S  L+GPI P+  KL +L+ L +S  ++SGP+P  + +L+ L FL L+ N LSG+IPS +S L  L  L L  N L GSIP SFG+           +  L G IPA LG
Sbjct:   29 SDGQALLSLKRP--SPSLFSSWDPQDQTPCSWYGITCS-ADNRVISVSIPDTFLN---LSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSSFGSLVSLQQFRLGGNTNLGGPIPAQLG 209          

HSP 2 Score: 94.7449 bits (234), Expect = 4.981e-19
Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  227 NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGS-MDFNTIDLSRNKL 700
            + + +L +    L G IP E+G L  + +L+     SL+G I P I+   +L    +S  +++G +P  + +L  L  L+LS N  +G IP  LS    L AL LD+NKL+GSIP   G    S    +L  N +SG IP+S G+  D   +DLSRNKL
Sbjct:  260 SELRNLYLHMNKLTGSIPKELGKLQKITSLLLWG-NSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLK-SLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKL 416          

HSP 3 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  242 LTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKL 700
            L ++     G +P E+ ++  LE L  H    +TG I   +  L NL+ L +S  + +G +P     L+ L  L L+ N L+G IP S+  LQKL  L L  N L+G IP+  G  T  T +L LS+N  +G IP +   +    ++DLS N L
Sbjct:  481 LDLYMNHFSGGLPYEISNITVLELLDVHN-NYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSL 633          

HSP 4 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 59/173 (34.10%), Postives = 88/173 (50.87%), Query Frame = 2
Query:  185 DCCDWYCVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDF-NTIDLSRNKL 700
            +C D   V  DLS N+          L G+IP E+  L  L  L+     SL+G +  ++AK ++L  LR+    +SG +P  I +L NL FL+L  N+ SG +P  +S +  L  L +  N +TG IP   G    +   L LS N  +G IP S G++ + N + L+ N L
Sbjct:  402 NCTD--LVALDLSRNK----------LTGRIPEELFSLKRLSKLLLLG-NSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLV-NLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLL 560          

HSP 5 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 57/147 (38.78%), Postives = 72/147 (48.98%), Query Frame = 2
Query:  263 LPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTI-DLSRNKL 700
            L G IPS  G L  L+        +L GPI   +  LKNL TL  + + +SG +P     L NL  L L    +SGTIP  L    +L  L+L  NKLTGSIP+  G     T  L L  N LSG IP  + +     + D+S N L
Sbjct:  175 LNGSIPSSFGSLVSLQQFRLGGNTNLGGPIPAQLGFLKNLTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTIPPQLGLCSELRNLYLHMNKLTGSIPKELGKLQKIT-SLLLWGNSLSGVIPPEISNCSSLVVFDVSANDL 320          

HSP 6 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 58/169 (34.32%), Postives = 79/169 (46.75%), Query Frame = 2
Query:  236 NSLTIF---AGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF-------------GTFTGSTPD----------LYLSHNQLSGKIPASLGSM 664
            +SL +F   A DL G IP ++G L +LE L        TG I   ++   +L  L++    +SG +P  I  L +L    L  N++SGTIPSS      L AL L RNKLTG IPE                + +G  P           L +  NQLSG+IP  +G +
Sbjct:  308 SSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSD-NMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGEL 475          
The following BLAST results are available for this feature:
BLAST of CN186533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PGIP_PYRCO1.202e-8977.45Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]
PGIP_VITVI4.423e-8473.76Polygalacturonase inhibitor OS=Vitis vinifera GN=p... [more]
PGIP1_ARATH4.890e-8371.84Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
PGIP2_ARATH5.790e-7666.99Polygalacturonase inhibitor 2 OS=Arabidopsis thali... [more]
PGIP1_PHAVU1.941e-4746.19Polygalacturonase inhibitor 1 OS=Phaseolus vulgari... [more]
PGIP2_PHAVU2.146e-4645.71Polygalacturonase inhibitor 2 OS=Phaseolus vulgari... [more]
PGIP3_PHAVU2.803e-4645.24Polygalacturonase inhibitor 3 OS=Phaseolus vulgari... [more]
PGIP1_ORYSJ7.392e-3943.84Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]
DR100_ARATH2.914e-2733.33DNA-damage-repair/toleration protein DRT100 OS=Ara... [more]
Y1341_ARATH5.143e-2439.04Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0003A22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186533 ID=CN186533; Name=CN186533; organism=Citrus sinensis; type=EST; length=704bp
AGTCAGCTTCCCTACTCTTCAAAACATGAGCAACACGTCACTATTGTCTC
TGATCTTCATCTTGTCCCTTTTCATCTCCCCTTCACTCTCAGACCTCTGC
AACCCAAATGACAAAAAAGTGCTTCTCAAATTCAAAAAAGCTTTGAACAA
CCCTTACGTTCTAGCTTCTTGGAACCCAAAAACTGACTGCTGTGACTGGT
ACTGCGTCACATGCGATCTCTCCACTAACCGCATCAATTCTCTCACCATC
TTCGCCGGAGATCTCCCCGGCCAGATCCCCTCCGAAGTTGGTGATCTTCC
TTACCTCGAAACCCTAATGTTTCACAAGCTACCCAGCCTCACTGGCCCCA
TACAACCCGCCATTGCCAAGCTCAAAAACCTGAAGACGCTACGTATTAGC
TGGACAAACATTTCTGGGCCGGTTCCTGATTTTATCAGCCAACTCACCAA
CTTAACATTCTTGGAGCTTTCATTTAACAATCTTTCTGGGACGATCCCAA
GTTCACTTTCGAAGCTGCAGAAGCTTGGCGCTCTTCATTTGGACAGAAAC
AAGCTTACGGGTTCAATCCCTGAGTCTTTTGGTACATTCACCGGGAGTAC
ACCCGATCTTTACTTGTCACATAACCAGCTCTCTGGCAAAATCCCTGCCT
CTTTAGGCAGCATGGATTTTAACACCATTGACTTGTCCAGGAACAAGCTT
GAAG
back to top