CN186511

Overview
NameCN186511
Unique NameCN186511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5431 contig Csv1_Contig5431:15..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: ATB15_ARATH (Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 8.525e-98
Identity = 173/216 (80.09%), Postives = 190/216 (87.96%), Query Frame = -1
Query:  146 DSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC--EGNESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 787
            D S      +SV+TIAF+F  E H+QE+VASMARQYVRGII+SVQRVALALSPS   S  GLR P G+PEA TLARWICQSYR Y+G ELLK   +GNESILK LWHH+DA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRKTLCSEFPQIMQQGF CLQ GICLSSMGRP+SYERAVAWKVLNEEENAHCICF+FINWSFV
Sbjct:  621 DQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: ATHB8_ARATH (Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.722e-90
Identity = 164/217 (75.58%), Postives = 189/217 (87.10%), Query Frame = -1
Query:  146 GDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGNESILKTLWHHSDAVLCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFD-DSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 790
            GDS    G++KSV+TIAFQ AFEMH+QENVASMARQYVR +IASVQRVALALSPS     +GLRPPP SPEAHTLARWI  SYRCYLG +LLK  G + +LK+LWHH DAV+CCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD ++G+KTL SEFPQIMQQGFMC+  GIC+SSMGR ++YE+AV WKVLN++E+ HCICFMF+NWSF+
Sbjct:  619 GDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIASVQRVALALSPSSH-QLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLKPHGTD-LLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSJ (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. japonica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.746e-83
Identity = 143/216 (66.20%), Postives = 183/216 (84.72%), Query Frame = -1
Query:  146 DSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGN--ESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 787
            D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQRVA+A++PSR G     + PPGSPEAHTLARWI +SYR + GA+LL+ +    +S LK +W HSD+++CCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRK LC+EFP+IMQQGF  L  G+C+SSMGRP+SYE+AVAWKVL++++  HC+ FMF+NWSFV
Sbjct:  645 DTSSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSI (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.746e-83
Identity = 143/216 (66.20%), Postives = 183/216 (84.72%), Query Frame = -1
Query:  146 DSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEGN--ESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 787
            D+S+ C +T+SV+TIAFQF++E HL+E+VA+MARQYVR ++ASVQRVA+A++PSR G     + PPGSPEAHTLARWI +SYR + GA+LL+ +    +S LK +W HSD+++CCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRK LC+EFP+IMQQGF  L  G+C+SSMGRP+SYE+AVAWKVL++++  HC+ FMF+NWSFV
Sbjct:  645 DTSSTC-NTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSMDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.043e-75
Identity = 138/216 (63.89%), Postives = 172/216 (79.63%), Query Frame = -1
Query:  146 STKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF----GSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC----EGNESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLN-EEENAHCICFMFINWSFV 766
            S+K+V+TIAFQFAF+ HLQ++VA+MARQY+R II+SVQR+A+ALS SR        A  +  P +PEA TL RWICQSYR + G EL+K       NESILK +WHH  A+LCCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK LC+E P IM+QG  C++ G+C+SS+GR  SYE+AVAWKV++ +   AHCICFMFINW+F+
Sbjct:  653 SSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPVTPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 868          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.552e-75
Identity = 138/216 (63.89%), Postives = 173/216 (80.09%), Query Frame = -1
Query:  146 STKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRF----GSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC----EGNESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLN-EEENAHCICFMFINWSFV 766
            S+K+V+TIAFQFAF+ HLQ++VA+MARQY+R II+SVQR+A+ALS SR      + A  +  P +PEA TL RWICQSYR + GAEL+K       NESILK +WHH  A+LCCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK LC+E P IM+QG  C++ G+C+SS+GR  SYE+AVAWKV++ +   AHCI FMFINW+F+
Sbjct:  646 SSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAAAAAAQLSPVTPEAATLPRWICQSYRFHFGAELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCISFMFINWTFL 861          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSJ (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica GN=HOX9 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.014e-74
Identity = 132/217 (60.83%), Postives = 175/217 (80.65%), Query Frame = -1
Query:  146 GDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC--EGNESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 790
            GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+ +LG ELL+   +  E++LK LW + DA+LCCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD++GRK L +E P++M+QG++ L  G+CLS MGR +S+E+AVAWKVL E+ N HC+ F F+NWSFV
Sbjct:  624 GDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSI (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica GN=HOX9 PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.014e-74
Identity = 132/217 (60.83%), Postives = 175/217 (80.65%), Query Frame = -1
Query:  146 GDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKC--EGNESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 790
            GD+S    + +SV+TIAFQF +EMHLQ++VA+MARQYVR I++SVQRV++A+SPSR G NAG +   G PEA TLARWICQSY+ +LG ELL+   +  E++LK LW + DA+LCCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD++GRK L +E P++M+QG++ L  G+CLS MGR +S+E+AVAWKVL E+ N HC+ F F+NWSFV
Sbjct:  624 GDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: REV_ARATH (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana GN=REV PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.730e-74
Identity = 139/220 (63.18%), Postives = 170/220 (77.27%), Query Frame = -1
Query:  146 SSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELLKCEG---NESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEE----NAHCICFMFINWSFV 784
            +S    S++ ++TIAFQF FE +LQENVA MA QYVR +I+SVQRVA+A+SPS    + G +  PGSPEA TLA+WI QSY  +LG+ELL  +    ++S+LK LW H DA+LCCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+SGRK +CS+F ++MQQGF CL SGIC+S+MGR +SYE+AVAWKV    E    N HC+ F F+NWSFV
Sbjct:  623 NSFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842          
BLAST of CN186511 vs. ExPASy Swiss-Prot
Match: HOX10_ORYSJ (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica GN=HOX10 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.912e-73
Identity = 130/217 (59.91%), Postives = 175/217 (80.65%), Query Frame = -1
Query:  146 GDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCYLGAELL-KCEGN-ESILKTLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDSGRKTLCSEFPQIMQQGFMCLQSGICLSSMGRPISYERAVAWKVLNEEENAHCICFMFINWSFV 790
            GD+S    + +SV+TIAFQF +E+HLQ++VA+MARQYVR I+++VQRV++A+SPS+ G NAG R   G PEA TLARW+CQSY  +LG ELL + +G+ E +LK LWH+ DA+LCCS K  PVFTFAN+AGLDMLET+LVALQD+TL++IFD+ G++ L S  P++M+QG + L SG+C+S MGR +S+++AVAWKVL E+ N HC+ F F+NWSFV
Sbjct:  623 GDASADDCNLRSVLTIAFQFPYELHLQDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQSDGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWSFV 839          
The following BLAST results are available for this feature:
BLAST of CN186511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ATB15_ARATH8.525e-9880.09Homeobox-leucine zipper protein ATHB-15 OS=Arabido... [more]
ATHB8_ARATH1.722e-9075.58Homeobox-leucine zipper protein ATHB-8 OS=Arabidop... [more]
HOX32_ORYSJ7.746e-8366.20Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX32_ORYSI7.746e-8366.20Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX29_ORYSJ2.043e-7563.89Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
HOX29_ORYSI4.552e-7563.89Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
HOX9_ORYSJ1.014e-7460.83Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
HOX9_ORYSI1.014e-7460.83Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
REV_ARATH1.730e-7463.18Homeobox-leucine zipper protein REVOLUTA OS=Arabid... [more]
HOX10_ORYSJ1.912e-7359.91Homeobox-leucine zipper protein HOX10 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186511 ID=CN186511; Name=CN186511; organism=Citrus sinensis; type=EST; length=790bp
TTTTTGGGGAGCTGCTGCATTTTCATGAAACTATTTAAGCCAATACAATA
ACGTTTTCCACAGAAAAAGGACTACAAAGAAGATTGTTCTACTCTAAACC
TGCATCTAGATTCTAGGTTTTGACCGAAGTCTCTTCTGTCTTTCAGACGA
ATGACCAGTTGATGAACATGAAGCAAATGCAGTGAGCATTCTCTTCTTCA
TTCAACACTTTCCAAGCCACTGCTCTTTCATAAGAGATTGGCCTTCCCAT
GCTTGACAAACAAATACCACTTTGAAGACACATAAAGCCCTGTTGCATTA
TTTGCGGGAACTCAGAGCACAAGGTCTTTCTTCCACTGTCATCAAAAATT
TTTTCCAGAGTTATATCCTGAAGCGCAACCAAGGTTGTCTCAAGCATGTC
AAGTCCTGCCTGATTTGCAAAGGTGAAAACTGGCAAAGCCTTTAGCGAGC
AGCACAAAACCGCATCAGAGTGATGCCAAAGTGTTTTGAGAATGGATTCA
TTTCCTTCACATTTAAGTAGTTCCGCTCCTAGATAGCACCGATAGCTTTG
GCAGATCCAACGAGCAAGTGTGTGTGCTTCAGGAGAACCAGGAGGAGGTC
GAAGTCCAGCATTAGAGCCAAATCGAGAAGGGGAGAGCGCCAATGCCACT
CTCTGGACAGAGGCTATAATACCACGGACATACTGCCTAGCCATTGATGC
TACATTTTCTTGAAGGTGCATCTCAAATGCAAATTGAAATGCTATTGTAA
TCACAGATTTTGTGCTGCCACATTGAGTGGAAGAGTCACC
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