CX675019

Overview
NameCX675019
Unique NameCX675019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4331 contig Csv1_Contig4331:16..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSL1_SOLTU (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 8.928e-98
Identity = 172/197 (87.31%), Postives = 188/197 (95.43%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GDLLKV+FVPDYNVSVAELLIPAS+LS+HISTAGMEASGTSNMKFAMNGCI IGTLDGANVEIR+EVGEENFFLFGA+AHEIAGLRKER++GKFVPD RFEEVK+FV+SG FGSYNYD+L+GSLEGNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY DQKRWT MSI+NTAGS KFSSDRTI EYA+DIWNI  VE+
Sbjct:  769 GDLLKVVFVPDYNVSVAELLIPASDLSEHISTAGMEASGTSNMKFAMNGCIQIGTLDGANVEIREEVGEENFFLFGAQAHEIAGLRKERADGKFVPDERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNIEAVEI 965          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSL2_SOLTU (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.166e-97
Identity = 168/198 (84.85%), Postives = 189/198 (95.45%), Query Frame = -2
Query:  218 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 811
            GDLLKV+FVPDYNVSVAE+LIP SELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+EVGE+NFFLFGA+AHEIAGLRKER+EGKFVPD RFEEVK F+++GVFG+YNY+ELMGSLEGNEG+G+ADYFLVGKDFP Y+ECQ+KVDEAY DQK+WT+MSI+NTAGS KFSSDRTI +YARDIW I PVELP
Sbjct:  777 GDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSMNGCLLIGTLDGANVEIREEVGEDNFFLFGAQAHEIAGLRKERAEGKFVPDPRFEEVKAFIRTGVFGTYNYEELMGSLEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDQKKWTKMSILNTAGSFKFSSDRTIHQYARDIWRIEPVELP 974          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSL_VICFA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 2.598e-97
Identity = 172/197 (87.31%), Postives = 188/197 (95.43%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GDLLKVIFVPDYNVSVAE+LIPASELSQHISTAGMEASGTSNMKFAMNGC+ IGTLDGANVEIR+EVG +NFFLFGA+A EI GLRKER+ GKFVPD RFEEVKKFV+SGVFGSYNYDEL+GSLEGNEGFG+ADYFLVG+DFPSYLECQE+VD+AY DQK+WTRMSI+NTAGSSKFSSDRTI EYAR+IWNI PV+L
Sbjct:  806 GDLLKVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCLQIGTLDGANVEIREEVGADNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREIWNIEPVKL 1002          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSL_IPOBA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 9.871e-97
Identity = 174/198 (87.88%), Postives = 182/198 (91.92%), Query Frame = -2
Query:  218 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 811
            GDLLKVIFVPDYNVS AELLIPAS LSQHISTAGMEASG SNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA AHEIAGLRKER+EGKFVPD RFEEVK+F+K GVFGS  YDEL+GSLEGNEGFG+ DYFLVGKDFPSY+ECQEKVDEAY DQK WTRMSI+NTAGS KFSSDRTI EYA+DIWNI PV  P
Sbjct:  758 GDLLKVIFVPDYNVSAAELLIPASGLSQHISTAGMEASGQSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAEAHEIAGLRKERAEGKFVPDERFEEVKEFIKRGVFGSNTYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQEKVDEAYRDQKIWTRMSILNTAGSYKFSSDRTIHEYAKDIWNIQPVVFP 955          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSH_ARATH (Alpha-glucan phosphorylase, H isozyme OS=Arabidopsis thaliana GN=At3g46970 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.692e-80
Identity = 143/197 (72.59%), Postives = 169/197 (85.79%), Query Frame = -2
Query:  218 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 808
            + LKV+FVP+YNV+VAE+LIP SELSQHISTAGMEASGTSNMKFA+NGC++IGTLDGANVEIR+EVGEENFFLFGA A ++  LRKER +G F PD RFEE K+FVKSGVFGSY+Y  L+ SLEGN GFG+ DYFLVG DFPSY++ Q KVDEAY D+K W +MSI++TAGS KFSSDRTI +YA++IWNI    +P
Sbjct:  645 EYLKVVFVPNYNVTVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFLFGATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEACPVP 841          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSH_VICFA (Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.768e-80
Identity = 142/195 (72.82%), Postives = 168/195 (86.15%), Query Frame = -2
Query:  218 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 802
            LKV+FVP+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKFA+N  ++IGTLDGANVEIR+E+GEENFFLFGA A E+  LRKER  G F PD RFEE KKF++SGVFGSY+Y+ L+ SLEGN G+G+ DYFLVG DFPSY++ QEKVDEAY D+KRW +MSI++TAGS KFSSDRTI +YA++IWNI    +P
Sbjct:  648 LKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNRVLIIGTLDGANVEIREEIGEENFFLFGATADEVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLDSLEGNSGYGRGDYFLVGYDFPSYMDAQEKVDEAYRDKKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECRVP 842          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSH_WHEAT (Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.428e-80
Identity = 136/195 (69.74%), Postives = 169/195 (86.67%), Query Frame = -2
Query:  218 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 802
            LKV+F+P+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKF++NGC++IGTLDGANVEIR+EVG++NFFLFGA+A ++AGLRK+R  G F PD RFEE K+F++SG FG+Y+Y  L+ SLEGN GFG+ DYFLVG DFPSY++ Q +VDEAY D+K+W +MSI+NTAGS KFSSDRTI +YA++IW I    +P
Sbjct:  638 LKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGQDNFFLFGAKADQVAGLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYTPLLDSLEGNTGFGRGDYFLVGYDFPSYIDAQARVDEAYKDKKKWVKMSILNTAGSGKFSSDRTIDQYAKEIWGISACPVP 832          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSH_SOLTU (Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.428e-80
Identity = 137/197 (69.54%), Postives = 169/197 (85.79%), Query Frame = -2
Query:  218 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 808
            D LKV+FVP+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKFA+NGC++IGTLDGANVEIR+E+GE+NFFLFGA A E+  LRK+R  G F PD RFEE K+F++SG FG+Y+Y+ L+ SLEGN G+G+ DYFLVG DFPSY++ Q +VDEAY D+KRW +MSI++T+GS KFSSDRTI +YA++IWNI    +P
Sbjct:  642 DYLKVVFVPNYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEDNFFLFGATADEVPQLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDEAYKDRKRWIKMSILSTSGSGKFSSDRTISQYAKEIWNIAECRVP 838          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHS2_DICDI (Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.155e-51
Identity = 97/193 (50.26%), Postives = 138/193 (71.50%), Query Frame = -2
Query:  236 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY-NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 811
            GDLLKV+F+P+Y VS AE++IPAS++SQHISTAG EASGTSNMKF+MNG ++IGTLDGAN+EIR  +G EN ++FGAR+ E+  ++K   +GKF PD R+  V   +K   FG +  + +++ S+ G       D++++  DF SYL+ Q  +D+ + D+ +W + SIM +    KFSSDRTI+EYA+ IW I
Sbjct:  720 GDLLKVVFIPNYCVSNAEIIIPASDISQHISTAGTEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVNKVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGN-----DHYILSYDFGSYLDIQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGI 907          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_SYNY3 (Glycogen phosphorylase OS=Synechocystis sp. (strain PCC 6803) GN=glgP PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.445e-47
Identity = 109/211 (51.66%), Postives = 136/211 (64.45%), Query Frame = -2
Query:  209 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG-----KFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV--ELP*LC 811
            GD LKVIF+PDYNV   + + PA++LS+ ISTAG EASGT NMKF+MNG + IGTLDGAN+EIR+EVG ENFFLFG    E+    K  +EG      +  +A  + V   + SG F   +   +  LM SL G       D +LV  DF +Y++CQ +V EAY DQ+ W RM+I+N A   KFSSDRTI+EYA DIW I PV  EL  LC
Sbjct:  636 GDRLKVIFLPDYNVKFGQRVYPAADLSEQISTAGKEASGTGNMKFSMNGALTIGTLDGANIEIREEVGAENFFLFGLTTPEV---EKTLAEGYQPWEYYNNNANLKAVVDLINSGFFSHGDTALFRPLMDSLLGQ------DPYLVFADFQAYVDCQNQVGEAYKDQENWARMAILNVARMGKFSSDRTIREYAEDIWAIKPVVIELEDLC 837          
The following BLAST results are available for this feature:
BLAST of CX675019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PHSL1_SOLTU8.928e-9887.31Alpha-1,4 glucan phosphorylase L-1 isozyme, chloro... [more]
PHSL2_SOLTU1.166e-9784.85Alpha-1,4 glucan phosphorylase L-2 isozyme, chloro... [more]
PHSL_VICFA2.598e-9787.31Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL_IPOBA9.871e-9787.88Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSH_ARATH1.692e-8072.59Alpha-glucan phosphorylase, H isozyme OS=Arabidops... [more]
PHSH_VICFA3.768e-8072.82Alpha-glucan phosphorylase, H isozyme OS=Vicia fab... [more]
PHSH_WHEAT6.428e-8069.74Alpha-glucan phosphorylase, H isozyme OS=Triticum ... [more]
PHSH_SOLTU6.428e-8069.54Alpha-glucan phosphorylase, H isozyme OS=Solanum t... [more]
PHS2_DICDI2.155e-5150.26Glycogen phosphorylase 2 OS=Dictyostelium discoide... [more]
PHSG_SYNY31.445e-4751.66Glycogen phosphorylase OS=Synechocystis sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B08-C15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675019 ID=CX675019; Name=CX675019; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTGAAACAAGATTTTCAGTTCTTATTTATTTTATTCTATTAACTAC
GTAATACAGTAATTATATTCATCGAAGATACATTTATTCACGGCTTTCAT
CCAGGGATCATAAGCATTTTGCTTTACATAGAACATATATCAACAGGATG
CCATAAGTGATCAGAAAAGCCTGTGGTAGTCCCAACTCAAGTACTAGGAA
CAAGCATTACACAGTCACGGCAATTCGACGGGTATTATGTTCCATATGTC
TCGGGCATATTCCTGAATCGTTCTGTCGCTGCTGAACTTGGATGAACCCG
CTGTGTTCATGATCGACATTCTCGTCCATCTCTTTTGATCGCAATATGCT
TCATCAACCTTCTCTTGGCATTCCAAGTAACTAGGGAAATCTTTGCCCAC
GAGGAAATAATCTGCCTGGCCAAAACCTTCATTTCCTTCCAGTGATCCCA
TTAGTTCATCATAGTTGTAAGAACCAAAAACACCAGATTTGACAAATTTC
TTCACTTCTTCAAAACGTGCGTCGGGAACAAATTTCCCCTCAGATCTTTC
TTTTCTCAATCCTGCAATCTCGTGGGCTCTGGCACCAAATAGGAAAAAGT
TCTCCTCTCCAACCTCTTGCCGTATTTCAACATTGGCACCATCCAAGGTT
CCAATCAAAATGCAACCATTCATTGCAAATTTCATGTTACTGGTACCACT
AGCCTCCATCCCGGCAGTACTGATGTGTTGTGAGAGCTCACTTGCAGGTA
TAAGCAATTCAGCCACACTTACATTGTAATCAGGGACAAAAATAACCTTC
AATAAGTCACCT
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