CN186445

Overview
NameCN186445
Unique NameCN186445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12402 contig Csv1_Contig12402:30..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 3.615e-92
Identity = 164/199 (82.41%), Postives = 192/199 (96.48%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNN-DSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIILI 732
            MAI+F+LVARG+VVL+E SAT+TNAS+I++QIL+K+PGN+ DSH+SYSQDRYIFHVKRTDGLTVLCMAD+TAGR IPFAFL+DIHQRFVKTYGRA+ SAQAY MNDEFSRVLSQQME+YS+DPNADR++RIKGEMSQVRNVMIENIDKVL+RG+RLELLVDKT NMQGNTFRFRKQARR+R+ +WWRNVKLT+ALI+++
Sbjct:    1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVL 199          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.721e-92
Identity = 164/198 (82.83%), Postives = 189/198 (95.45%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIILI 732
            MAIL++LVARG+VVL+E +AT+TNAS IA+QIL+K+PG+NDS+VSYSQDRY+FHVKRTDGLTVLCMA++TAGRRIPFAFLEDIHQRFV+TYGRAV +A AY MN+EFSRVLSQQ++YYS+DPNADRINRIKGEM+QVR VMIENIDKVL+RG+RLELLVDKTANMQGNTFRFRKQARRFRS VWWRN KLTV LI+L+
Sbjct:    1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLL 198          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.983e-90
Identity = 159/198 (80.30%), Postives = 185/198 (93.43%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIILI 732
            M+IL++LVARG+VVLAE S T+TNAS IA+QIL+KIPGN DSHVSYSQDRY+FHVKRTDGLTVLCMAD+ AGRRIPF+FLEDIHQRFV+TYGRA+ SAQAY MNDEFSRVL+QQ+EYYS+DPNAD I+RIKGEM+QVR+VMIENID +L+RG+RLELLVDKTANMQGNTFRFRKQ RRF +TVWWRN KLT+ LI+++
Sbjct:    1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVL 198          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.691e-65
Identity = 116/199 (58.29%), Postives = 160/199 (80.40%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKI-PGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIILI 732
            MAI++++VARG+VVLAE SA   N  A+ R+IL+K+ P  +D  + +SQDRYIFH+ R+DGLT LCMA+DT GRR+PF++LE+IH RF+K YG+   +A AY MNDEFSRVL QQME++S +P+ D +NR++GE+S++R+VM+ENI+K++ERGDR+ELLVDKTA MQ ++F FRKQ++R R  +W +N KL V L  LI
Sbjct:    1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLI 199          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.385e-45
Identity = 91/201 (45.27%), Postives = 139/201 (69.15%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENI-DKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVAL--IILI 732
            M I++SLVARGS VLAE ++T  N   I R+ILD IP N D+ +SY  ++YIFH   +D LT LCMAD+  GRRIPF FL+D+  RF   YG    +A AYGMN +FSR L   M++YS+    D ++R   E+ +V+N+++ +I  ++L+RG+++E+LV++T  +   +F+F+KQ+++ +  +WW+NVKL + L  I+LI
Sbjct:    1 MPIIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPN-DTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLI 200          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36
Identity = 74/197 (37.56%), Postives = 124/197 (62.94%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIIL 729
            MAILF++VARG+ +LA+ +    N   +  QIL KIP  N+  ++YS   Y+FH    D +  LC+ DD   R   F+FL ++ +RF  TYG    +A  Y MN EFS VL+ Q++++S++ + D++   + ++ +++ +M+ NID V +RG+RLELL+DKT N+  ++  F+  +R     +  +N+KLT+ +II+
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKLTIIIIIV 196          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.798e-36
Identity = 74/197 (37.56%), Postives = 122/197 (61.93%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIIL 729
            MAILF++VARG+ +LA+ +    N   +  QIL KIP  N+  ++YS   Y+FH    D +  LC+ DD   R   F FL ++ +RF  TYG    +A  Y MN EFS VL+ Q++++S++ + DR+   + ++ +++ +M+ NID V +RG+RLELL+DKT N+  ++  F+  +R     +  +NVKLT  ++++
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIVVV 196          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.184e-36
Identity = 75/197 (38.07%), Postives = 122/197 (61.93%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIIL 729
            MAILF++VARG+ +LA+ +    N   +  QIL KIP  N+  ++YS   Y+FH    D +  LC+ DD   R   F FL +I +RF  TYG    +A  Y MN EFS VL+ Q++++S++   D++   + ++ +++ +M+ NID V +RG+RLELL+DKT N+  ++  F+  +R     +  +N+KLT+ +II+
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIII 196          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 75/197 (38.07%), Postives = 122/197 (61.93%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIIL 729
            MAILF++VARG+ +LA+ +    N   +  QIL KIP  N+  ++YS   Y+FH    D +  LC+ DD   R   F FL +I +RF  TYG    +A  Y MN EFS VL+ Q++++S++   D++   + ++ +++ +M+ NID V +RG+RLELL+DKT N+  ++  F+  +R     +  +N+KLT+ +II+
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIV 196          
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35
Identity = 75/197 (38.07%), Postives = 121/197 (61.42%), Query Frame = 1
Query:  139 MAILFSLVARGSVVLAECSATATNASAIARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIIL 729
            MAILF++VARG+ +LA+ +    N   +  QIL KIP  N+  ++YS   Y+FH    D +  LC+ DD   R   F FL +I +RF  TYG    +A  Y MN EFS VL+ Q++Y+S+    D++   + ++ +++ +M+ NID V +RG++LELL+DKT N+  ++  F+  +R     +  +N+KLT+ +II+
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNK-LTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIV 196          
The following BLAST results are available for this feature:
BLAST of CN186445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
VA713_ARATH3.615e-9282.41Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA711_ARATH4.721e-9282.83Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA712_ARATH1.983e-9080.30Vesicle-associated membrane protein 712 OS=Arabido... [more]
VA714_ARATH1.691e-6558.29Vesicle-associated membrane protein 714 OS=Arabido... [more]
VAM7B_DICDI7.385e-4545.27Vesicle-associated membrane protein 7B OS=Dictyost... [more]
VAMP7_MOUSE2.813e-3637.56Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_RAT4.798e-3637.56Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_BOVIN8.184e-3638.07Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_HUMAN1.069e-3538.07Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_CHICK1.069e-3538.07Vesicle-associated membrane protein 7 OS=Gallus ga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186445 ID=CN186445; Name=CN186445; organism=Citrus sinensis; type=EST; length=733bp
GCGTTTCTGATCGCCGAAACAACTAAAAGGAAAGAGAATTACCCCGGATC
TAGGTCAATTAATTGTTAATCAACTCGAGGAAGTGTTGTAGCTAATTGAT
CGGCGATTAAGCAATTAATCGCATAGAGAGAAAGAGAGATGGCGATACTT
TTCTCTTTAGTGGCTCGAGGATCGGTGGTGCTGGCGGAGTGCAGCGCCAC
GGCCACCAACGCCAGCGCCATCGCCAGACAAATACTGGATAAGATTCCGG
GGAATAATGACAGCCACGTGTCGTATTCTCAAGATCGTTATATCTTCCAC
GTCAAGCGCACCGATGGCCTCACCGTTCTCTGCATGGCGGATGATACCGC
CGGAAGGCGAATTCCTTTTGCATTTCTGGAAGACATTCATCAGAGATTTG
TGAAGACTTACGGCCGTGCAGTTCTTTCAGCCCAAGCTTATGGCATGAAT
GATGAATTTTCAAGGGTCTTGAGCCAGCAAATGGAGTATTATTCAGATGA
CCCAAATGCTGATAGGATAAATAGAATTAAAGGTGAAATGAGCCAGGTAA
GAAATGTCATGATAGAGAACATTGACAAAGTTTTAGAAAGAGGTGACCGC
TTGGAACTGTTGGTTGATAAAACTGCTAATATGCAAGGAAACACGTTCCG
CTTCAGAAAGCAGGCTAGGCGTTTCAGAAGCACAGTATGGTGGAGAAACG
TCAAGCTCACGGTTGCGCTGATTATCCTCATCC
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