CX674999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.132e-26 Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = -2 Query: 5 HKLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 532 H + IK GAR R + ++ + IN V+KLL FI P S VVLV K +G +R+CVD+ LNKA D FPLP+ID L+ + + +D SGY+QIPM +D TAF+T G + Y VMPFGL NA +T+ R + F+ L + + VY+DD++ S+ E Sbjct: 612 HDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 784
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 1.132e-26 Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = -2 Query: 5 HKLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 532 H + IK GAR R + ++ + IN V+KLL FI P S VVLV K +G +R+CVD+ LNKA D FPLP+ID L+ + + +D SGY+QIPM +D TAF+T G + Y VMPFGL NA +T+ R + F+ L + + VY+DD++ S+ E Sbjct: 586 HDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 758
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.702e-20 Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = -2 Query: 26 INGEVEKLLRAGFIREVNYPEWISNVVLVKKANG----KWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMI 454 + +V+++L G IRE N P V+ KK + K+R+ +D+ LN+ D +P+P +D+++ + +D G++QI M E+ TAF T G + Y MPFGL+NA AT+QR +N + +PL+ K VY+DD+I Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDII 368
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.901e-19 Identity = 71/265 (26.79%), Postives = 129/265 (48.68%), Query Frame = -2 Query: 26 KAMETGEAMQITSLDTRVENKNGRQEPVEDLETVSLGPENPGKTIRIGSRLKGEQ----KQELVKCLQAHADVFAWTHEDMPGIDPEVACHKLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANG------KWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMI 790 + + T ++ Q+ ++DT + EP+ + V E+ KT+ S+LK K +L + D+FA E P + +L +K + R + + E I +V+KL++ + E + ++ S ++LV K + KWR+ +D+ +NK D FPLP+ID ++D S +D SG++QI + E + T+F T+ G + + +PFGLK A ++QR++ F + +Y+DD+I Sbjct: 225 RILNTTDSDQLVNMDTL------KYEPLSNYNVVQANSEHRNKTVL--SQLKKNFPELFKSQLENICSEYIDIFALESE--PITVNNLYKQQLRLKDDEPVYTKNYRSPHSQ-VEEIQAQVQKLIKDKIV-EPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLI 477
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.095e-19 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = -2 Query: 14 INGEVEKLLRAGFIREVNYPE----WISNVVLVKKANGK--WRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 454 + ++++LL+ G IR N P WI V K NG+ +RM VDF LN D++P+P I+ + S + +D SG++QI M E D TAF T G + + +PFGLKNA A +QR+++ + + IGK VY+DD+I S+ Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWI--VPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSE 289
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.654e-19 Identity = 64/212 (30.19%), Postives = 101/212 (47.64%), Query Frame = -2 Query: 17 LKGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACHKLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANG----KWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKS 640 L E+KQ L LQ + D+ HE H + K + + Q + + +++ +L G IR N P V+ KK + K+R+ +D+ LN+ D P+P +D+++ + +D G++QI M + TAF T G + Y MPFGLKNA AT+QR +N + +PL+ K VY+DD+I S Sbjct: 165 LNNEEKQRLCALLQKYHDI--QYHEGDKLTFTNQTKHTINTKHNLPLY--SKYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFS 372
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.936e-18 Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = -2 Query: 14 INGEVEKLLRAGFIREVNYPEWISNVVLVKKA-----NGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 454 +N EV++LL+ G IR P V+ KK N R+ +DF LN+ D +P+P I ++ + + +D SGY+QI + E D E T+F N G + + +PFGL+NA + +QR ++ V + IGK VYVDD+I S+ Sbjct: 197 VNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSE 348
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera bertiana PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = -2 Query: 26 RMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMI 346 RMC+D+ L K K+ +P+P++D L D A + +D SGY Q+ + + DE T +T G F +RVMPFGL NA AT+ L+N V + + VY+DD++ Sbjct: 7 RMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTTCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLV 113
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.037e-16 Identity = 50/151 (33.11%), Postives = 80/151 (52.98%), Query Frame = -2 Query: 14 RYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 466 + +A+N E+ + L++G IRE V+ V K G RM VD+ LNK + +PLP I+QL+ G + + +D S Y+ I + + DE AF +G+F Y VMP+G+ A A +Q +N + + Y+DD++ SK Sbjct: 424 KMQAMNDEINQGLKSGIIRESKAIN-ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK 573
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: YRD6_CAEEL (Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15 Identity = 53/156 (33.97%), Postives = 87/156 (55.77%), Query Frame = -2 Query: 5 EAINGEVEKLLRAGFIREVNYPEWISNVVLVKK-ANGKWRMCVDF--TGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDD-MITKSKIRE 460 EA+ E+ +L G I + Y +W + +V++KK GK R+C DF +GLN A + PLP + + G + S +D Y Q+ + E+ ++ T++G+F Y M FGLK A A++Q++++K+ L G + VY DD +I+ S I E Sbjct: 454 EAVETELNRLQEMGVIVPITYAKWAAPIVVIKKKGTGKIRVCADFKCSGLNAALKDEFHPLPTSEDIFSRLKG-TVYSQIDLKDAYLQVELDEEAQKLAVINTHRGIFKYLRMTFGLKPAPASFQKIMDKMVSGLTG--VAVYWDDIIISASSIEE 606 The following BLAST results are available for this feature:
BLAST of CX674999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674999 ID=CX674999; Name=CX674999; organism=Citrus sinensis; type=EST; length=836bpback to top |