CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.216e-53
Identity = 111/169 (65.68%), Postives = 123/169 (72.78%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +WQ+VIDLNLTGVFLCTQ        +M+   K                      GRIINIASVVGLVGN  QANYSAAKAGVIG TK VA+EYASRNINVN +APGFI+SDMT+KLG+D+ KKILE IPLGRYGQPEEV GL EFLAINPA+ Y+TGQV  IDGGM M
Sbjct:  178 QWQEVIDLNLTGVFLCTQAAAK----IMMKKKK----------------------GRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDINKKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48
Identity = 103/169 (60.95%), Postives = 118/169 (69.82%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +VIDLNLTGVFLCTQ        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+V GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:  173 QWDEVIDLNLTGVFLCTQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48
Identity = 103/169 (60.95%), Postives = 118/169 (69.82%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +VIDLNLTGVFLCTQ        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+V GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:  186 QWDEVIDLNLTGVFLCTQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48
Identity = 103/169 (60.95%), Postives = 118/169 (69.82%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +VIDLNLTGVFLCTQ        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+V GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:  178 QWDEVIDLNLTGVFLCTQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.155e-48
Identity = 101/169 (59.76%), Postives = 118/169 (69.82%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +V+DLNLTGVFLC+Q        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+V GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:  112 QWDEVMDLNLTGVFLCSQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 254          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.903e-47
Identity = 101/169 (59.76%), Postives = 116/169 (68.64%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +VIDLNLTGVFLCTQ        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE V GL EFLA++PA+ YITG   +I GG  +
Sbjct:  175 QWDEVIDLNLTGVFLCTQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG6_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 3.788e-45
Identity = 99/165 (60.00%), Postives = 114/165 (69.09%), Query Frame = -3
Query:   80 VIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 574
            VI LNLTGVFLC+Q        +M+   K                      GRIINIASVVGL+GNI QANY+AAKAGVIG +K  A+E ASRNINVN + PGFIAS+MTAKLGED+EKKIL  IPLGRYGQPE+V GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:   63 VIALNLTGVFLCSQAATK----IMMKKRK----------------------GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASEMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 201          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.947e-45
Identity = 95/169 (56.21%), Postives = 115/169 (68.05%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W +VI LNLTGVFLCTQ  + +++                             +GRIINI+SVVGL+GNI QANY+AAK GVI  +K  A+E ASRNINVN + PGFIASDMTA+LGED+EKKIL  IPLGRYG+ EEV GL EFLA++PA  YITGQ   IDGG+ +
Sbjct:  177 QWDEVIALNLTGVFLCTQAAVKIMM--------------------------KKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGGIAI 319          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.258e-40
Identity = 92/168 (54.76%), Postives = 104/168 (61.90%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            WQ VIDLNLTGVFLCT+    ++L                              GRIINI SV G++GN  QANYSAAKAGVIG TK VAKE ASR + VN +APGFIA+DMT  L  +    IL+ IPL RYGQPEEV G   FLA +PA  YITGQ  N+DGGMVM
Sbjct:  108 WQAVIDLNLTGVFLCTKAVSKLML--------------------------KQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAE---PILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNVDGGMVM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35
Identity = 82/169 (48.52%), Postives = 108/169 (63.91%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVI++NL GVF CT+     ++                              GRIIN++S+VG+ GN  QANY AAKAGVIGLTK+ AKE ASRNI VN IAPGFI++DMT KL +D++ ++L++IPL R+G+P +V  +  FLA   A  Y+TGQ L+IDGGMVM
Sbjct:  105 EWDDVININLKGVFNCTKAVTRQMM--------------------------KQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGAR-YMTGQTLHIDGGMVM 246          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_CUPLA2.216e-5365.683-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG3_BRANA1.258e-4860.953-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA1.258e-4860.953-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA1.258e-4860.953-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
FABG4_BRANA8.155e-4859.763-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG5_BRANA6.903e-4759.763-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
FABG6_BRANA3.788e-4560.003-oxoacyl-[acyl-carrier-protein] reductase (Fragme... [more]
FABG_ARATH4.947e-4556.213-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG1_SYNY36.258e-4054.763-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG_BACSU6.062e-3548.523-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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