CN186426

Overview
NameCN186426
Unique NameCN186426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9782 contig Csv1_Contig9782:85..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.569e-21
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 2
Query:  548 LVLLNMLEVVTRDIMEDAVPSLLDSSHGGSYGKTEGMTPLDQQVHFFGALGFPVYPETEAWKEKIRRLHLL 760
            +VLLNMLE+VTRDIME+ VPSLL+++H GSY K + MTPL QQ  +F  L FPVY +TEAWKEKI+RLHLL
Sbjct:  968 IVLLNMLELVTRDIMEEEVPSLLETAHNGSYVKYDVMTPLHQQRKYFSQLRFPVYSQTEAWKEKIKRLHLL 1038          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.088e-21
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 2
Query:  548 LVLLNMLEVVTRDIMEDAVPSLLDSSHGGSYGKTEGMTPLDQQVHFFGALGFPVYPETEAWKEKIRRLHLL 760
            +VLLNMLEVVTRDIM++ VPS+L+S+H G+Y K + MTPL QQ  +F  L FPVY +TEAWKEKI+RLHLL
Sbjct:  969 IVLLNMLEVVTRDIMDEEVPSMLESTHNGTYVKYDVMTPLHQQRKYFSQLRFPVYSQTEAWKEKIKRLHLL 1039          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_METCA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Methylococcus capsulatus GN=MCA0497 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.188e-16
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = -2
Query:  165 LTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 491
            LT K+C PC    + P+  + A+ L+  V  W+L  ++   KL R+ + ++F + L+  + V ++ EAEGHHPD+  +GW   ++E  TH + GL ENDFI+AAK++ L
Sbjct:    6 LTAKQCTPCQG-GIPPLTAEEAEKLLVHVPRWEL--KDAATKLKRTFRFENFMEALDFARKVGELCEAEGHHPDIG-IGWGYCRVEFQTHKINGLHENDFIMAAKVDEL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_RUBXD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_2043 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16
Identity = 41/112 (36.61%), Postives = 69/112 (61.61%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L  K+CVPC    + P+  +  + L  ++ GW++V+E+    L RS + ++F + L+    V ++AE + HHPD+   GW   +I + TH + GLTE+DF+ AAK++RL
Sbjct:    1 MSELAEKECVPCKG-GVPPLKGEELERLARQLPGWEVVDEH---HLRRSFRFRNFREALDFVNRVGELAEEQNHHPDI-CFGWGRAEITVFTHKIDGLTESDFVFAAKVDRL 107          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_NITMU (Putative pterin-4-alpha-carbinolamine dehydratase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=Nmul_A0712 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            +DDL TK+C PC+   + P++++    LM ++ GW+ + +     + +    K++ + +     VA ++  E HHPD+  VG+N  Q+E  THA+GGL+ENDFI AAKI+ L
Sbjct:    5 IDDLATKQCKPCEGA-MPPLSQEEITQLMRQLDGWNYLGKT----IRKEFSFKNYYQTMAFVNAVAWISHREDHHPDI-TVGYNKCQVEYTTHAIGGLSENDFICAAKIDTL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_CHLL2 (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=Clim_1125 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M++L    CVPC      P+A D    L  ++  W++V E G+++L R+     F + L     V ++AEAEGHHP L +  W  V +E  TH+ GGL  NDFI+AA+   L
Sbjct:    1 MNELKHMACVPCAEAG-SPLAADEIDRLRQELPDWEVVTEEGMVRLRRTFTFPDFGQALAFTNRVGELAEAEGHHPRL-VTEWGRVTVEWWTHSAGGLHRNDFIMAARTGGL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_ALKMQ (Putative pterin-4-alpha-carbinolamine dehydratase OS=Alkaliphilus metalliredigens (strain QYMF) GN=Amet_4266 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15
Identity = 40/112 (35.71%), Postives = 68/112 (60.71%), Query Frame = -2
Query:  168 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKV-VGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINR 500
            M++L  KKC+PC      P++ D  K  + ++   W ++N++    L R  K K+F + L    ++  +AE EGHHPD+ L+ W  V+I + TH + GL+E+DF+ AAK+++
Sbjct:    1 MNNLAEKKCIPCSL-GTPPLSSDEIKRYISQLHEEWKVINDH---HLEREFKFKNFKEALSYTNVIGQLAEKEGHHPDM-LLSWGKVKITLFTHKIDGLSESDFVFAAKVDK 107          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_PELLD (Putative pterin-4-alpha-carbinolamine dehydratase OS=Pelodictyon luteolum (strain DSM 273) GN=Plut_0106 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M +L   KCV C ++ L P+AE  ++ L+ ++  W +V+E+G+ +L R+   ++F + +     V ++AE+E HHP L +  W  V++E  THAV GL  NDF++AA+ + L
Sbjct:    1 MGELNKTKCVSC-SEGLPPLAERESEELLKEIPEWVIVSEDGVSRLVRTFTFENFREAMAFAGSVGELAESEQHHPKL-VTEWGKVRVEWWTHAVHGLHMNDFVMAARTDEL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_CHLTE (Putative pterin-4-alpha-carbinolamine dehydratase OS=Chlorobium tepidum GN=CT0342 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  165 MDDLTTKKCVPCDTKDLRPMAEDSAKHLMPKVVGWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 500
            M  L  K CVPC+     PMA +  +  +  +  W LV+++G  KL R    K F   L+    V  +AEAEGHHP L L  W  V +   THA+GG+  ND I+A K  +L
Sbjct:    1 MTQLENKHCVPCEGT-AAPMASEELQRQLSSLPEWTLVDDSGTSKLVRVFTFKDFQSALDFTNRVGQLAEAEGHHPAL-LTEWGKVTVSWWTHAIGGIHLNDVIMATKTEKL 110          
BLAST of CN186426 vs. ExPASy Swiss-Prot
Match: PHS_NITEC (Putative pterin-4-alpha-carbinolamine dehydratase OS=Nitrosomonas eutropha (strain C91) GN=Neut_2288 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 41/111 (36.94%), Postives = 71/111 (63.96%), Query Frame = -2
Query:  165 DLTTKKCVPCDTKDLRPMAEDSAKHLMPKVV-GWDLVNENGILKLNRSLKVKSFTKGLELFKLVADVAEAEGHHPDLHLVGWNNVQIEICTHAVGGLTENDFILAAKINRL 494
            DL  +KC PC+   + P+ ++ A++L+ ++  GW L +     +++R+   K++ + +     VA V+  E HHPD+ +VG+N  ++E  THA+GGL+ENDFI AAK++ L
Sbjct:    6 DLADRKCKPCEG-GVPPLRKEEAENLLKQLEQGWQLADN----RISRTFSFKNYYQTMAFVNAVAWVSHQEDHHPDM-MVGYNQCRVEYTTHAIGGLSENDFICAAKVDML 110          
The following BLAST results are available for this feature:
BLAST of CN186426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CALS1_ARATH3.569e-2169.01Callose synthase 1 OS=Arabidopsis thaliana GN=CALS... [more]
CALS2_ARATH6.088e-2167.61Callose synthase 2 OS=Arabidopsis thaliana GN=CALS... [more]
PHS_METCA1.188e-1638.53Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_RUBXD2.027e-1636.61Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_NITMU4.515e-1637.50Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_CHLL22.927e-1538.39Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_ALKMQ2.927e-1535.71Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_PELLD4.992e-1536.61Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_CHLTE6.520e-1539.29Putative pterin-4-alpha-carbinolamine dehydratase ... [more]
PHS_NITEC1.112e-1436.94Putative pterin-4-alpha-carbinolamine dehydratase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186426 ID=CN186426; Name=CN186426; organism=Citrus sinensis; type=EST; length=762bp
ATTTTTATTCATAAAAGGAAGCCAAAGATACTTCTTCACCCCCTAGTTCT
TAATAGGGCATCAAAATTATGCTCGGGGTCTCCTTTAAAATGTTTTACAA
AGCCAGCACAAGTTTTGATAATCTCTCAAGCAGAAATCTTTCTCCTCAGT
AGGTGGTGAATATCAAGCCTATTGATCTTAGCAGCAAGTATGAAGTCATT
TTCAGTCAGTCCACCAACTGCATGCGTACATATCTCAATTTGTACATTGT
TCCATCCGACAAGATGAAGGTCTGGATGATGACCTTCTGCTTCAGCAACA
TCTGCTACAAGCTTAAATAACTCCAAACCTTTGGTGAAACTCTTCACTTT
CAAGGATCGGTTCAGCTTCAAGATACCATTTTCATTCACCAAATCCCACC
CTACTACCTTGGGCATTAAGTGCTTAGCACTATCTTCGGCCATGGGACGT
AAGTCCTTTGTGTCACATGGCACACACTTTTTAGTCGTCAAATCGTCCAT
TACGAGCAAACAGGCTTTCAAATACTGATCGTAGAGGTACCTGAGGCCTA
GTCTTGCTTAACATGCTAGAGGTTGTGACCAGAGACATAATGGAGGATGC
TGTTCCAAGTCTGTTAGATTCTAGCCATGGTGGGTCCTATGGAAAAACCG
AGGGAATGACACCCCTTGATCAACAAGTTCATTTTTTTGGTGCACTTGGA
TTTCCAGTTTACCCAGAAACAGAAGCCTGGAAAGAAAAGATCAGAAGACT
TCATCTATTGCT
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