CN186425

Overview
NameCN186425
Unique NameCN186425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN186425_ssr76 microsatellite CN186425_ssr76:76..91. BLAST: Citrus ESTs to Prunus persica proteins V1
CN186425_ssr105 microsatellite CN186425_ssr105:105..120. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5226 contig Csv1_Contig5226:562..1366. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.110e-84
Identity = 147/200 (73.50%), Postives = 173/200 (86.50%), Query Frame = -3
Query:  203 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 802
            ESWWE+EQ+HL YSGKRGI+VEILL+LRFF+YQYGLVYHL+ T+ T+NFLVYG SW+VI  +L ++K +SVGRRRFSA+FQL+FR+IKGL+             + HMT +DI++CILAFMPTGWG+LLIAQACKP++ R G W S++TLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG
Sbjct: 1754 ESWWEEEQEHLRYSGKRGIVVEILLALRFFIYQYGLVYHLTITEKTKNFLVYGVSWLVIFLILFVMKTVSVGRRRFSASFQLMFRLIKGLIFMTFIAIIVILITLAHMTIQDIIVCILAFMPTGWGMLLIAQACKPVVHRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 1953          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 1.149e-81
Identity = 148/202 (73.27%), Postives = 170/202 (84.16%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLS-FTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            ESWWEKE +HL +SG RGI +EI L+LRFF++QYGLVYHLS F    Q+F VYGASW VI+F+LL+VKG+ VGRRRFS NFQLLFR+IKGLV             +P +T KD+ +C+LAFMPTGWG+LLIAQACKPL+Q+ GIW S++TLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ
Sbjct: 1739 ESWWEKELEHLRHSGVRGITLEIFLALRFFIFQYGLVYHLSTFKGKNQSFWVYGASWFVILFILLIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMPTGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 1940          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 3.128e-79
Identity = 145/202 (71.78%), Postives = 168/202 (83.17%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLS-FTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            ESWWEKE  HL +SGKRGII+EI+L+LRFF++QYGLVY LS F +  Q+  +YGASW VI+F+LL+VKG+ VGR+RFS NFQLLFR+IKG V             +  +T KDI LC+LAFMPTGWG+LLIAQACKPL+QR G W S++TLARGYEI+MGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ
Sbjct: 1740 ESWWEKEIGHLRHSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFILLIVKGLGVGRQRFSTNFQLLFRIIKGFVFLTFLGLLITFLALRFLTPKDIFLCMLAFMPTGWGMLLIAQACKPLIQRLGFWSSVRTLARGYEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 1941          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS4_ARATH (Callose synthase 4 OS=Arabidopsis thaliana GN=CALS4 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.490e-60
Identity = 116/202 (57.43%), Postives = 147/202 (72.77%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFL-VYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            ESWWEK+ +HL +SGK GI+VEI  +LRFF++QYGLVY LS  K+  + L V+GASW++I+ +LL V  +   RRR    FQLLFR+IK  +                +  +D+ LC+LA +PTGWGLLLIAQ+CKPL+Q+ GIW  + TLA  Y++VMG LLF P+AF+AWFPF+SEFQTRMLFNQAFSRGL ISRIL GQ
Sbjct: 1660 ESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQ 1861          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.246e-60
Identity = 111/205 (54.15%), Postives = 151/205 (73.66%), Query Frame = -3
Query:  203 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQ-----NFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 802
            ESWWE+EQ+HLL+SG  G   EI LSLR+F+YQYG+VY L+ TK ++     + +VYG SW+VI+ V++++K +S+GR++FSA+FQL+FR++K  +                +T  DI+  +LAF+PTGW LL I+Q  +PLM+  G+W S+K LARGYE +MG+++F PV  LAWFPFVSEFQTR+LFNQAFSRGLQI RIL G
Sbjct: 1714 ESWWEEEQEHLLHSGFFGKFWEIFLSLRYFIYQYGIVYQLNLTKESRMGKQHSIIVYGLSWLVIVAVMIVLKIVSMGRKKFSADFQLMFRLLKLFLFIGSVVIVGMLFHFLKLTVGDIMQSLLAFLPTGWALLQISQVARPLMKTVGMWGSVKALARGYEYIMGVVIFMPVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAG 1918          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS7_ARATH (Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.236e-59
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            ESWW+ EQ+HL ++  RG ++EILL+LRF +YQYG+VYHL+  +    FLVYG SW +++ VLL++K +S+GRR+F  +FQ++FR++K L+             +  +T  D+   ILAF+PTGW +LLI QA + + +  G W+S+K L R YE +MGL++FTP+A L+WFPFVSEFQTR+LFNQAFSRGLQIS IL G+
Sbjct: 1724 ESWWDIEQEHLKHTNLRGRVLEILLALRFLLYQYGIVYHLNIARRHTTFLVYGLSWAILLSVLLVLKMVSMGRRKFGTDFQVMFRILKALLFLGFLSVMTVLFVVCGLTISDLFASILAFLPTGWAILLIGQALRSVFKGLGFWDSVKELGRAYEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGK 1924          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS6_ARATH (Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 5.741e-57
Identity = 103/201 (51.24%), Postives = 146/201 (72.64%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            ESWW  EQ+HL ++  RG I+EI L+LRFF+YQYG+VY L+ ++ +++FLVYG SWVV++  LL++K +S+GRRRF  +FQL+FR++K L+             +  +T  D+   +LAF+PTGW +LLI Q  +  ++  G+W+S+K L R YE +MGL++F P+A L+WFP VSEFQ R+LFNQAFSRGLQIS IL G+
Sbjct: 1712 ESWWNVEQEHLKHTSIRGRILEITLALRFFIYQYGIVYQLNISQRSKSFLVYGLSWVVLLTSLLVLKMVSMGRRRFGTDFQLMFRILKALLFLGFLSVMTILFVVFKLTLTDLSASVLAFLPTGWAILLIGQVLRSPIKALGVWDSVKELGRAYENIMGLVIFAPIAVLSWFPIVSEFQARLLFNQAFSRGLQISMILAGR 1912          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.113e-51
Identity = 100/201 (49.75%), Postives = 130/201 (64.68%), Query Frame = -3
Query:  200 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 802
            +SWW  EQ HL  SG     +EI+LSLRFF+YQYGLVYHL  T+S  N +VY  SWVVI+     VK + +GR+ FS    L+FR  K  V             I H++ KD+L+  LAF+PTGWGL+LIAQA +P ++   +WE  + LAR Y+  MG++LF P+A LAW P +S FQTR LFN+AF+R LQI  IL G+
Sbjct: 1772 QSWWNDEQAHLRGSGVGARCLEIILSLRFFVYQYGLVYHLDITQSNTNIIVYALSWVVILATFFTVKAVDLGRQLFSTRKHLVFRFFKVFVFVSILTIIITLANICHLSVKDLLVSCLAFLPTGWGLILIAQAVRPKIEGTSLWEFTQVLARAYDYGMGVVLFAPMAILAWLPIISAFQTRFLFNEAFNRRLQIQPILAGK 1972          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALS9_ARATH (Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.159e-49
Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = -3
Query:  203 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 802
            E+WWE+E  H+     R  I+E +LSLRFF++QYG+VY L    S  +F VYG SWV    +++L K  +  ++  S NFQLL R I+GL              +  ++  DI  C+LAF+PTGWG+L IA A KP+++R G+W+SI++LAR Y+ +MG+L+F PVA  +WFPFVS FQTRM+FNQAFSRGL+IS IL G
Sbjct: 1728 EAWWEEELSHIRTLSGR--IMETILSLRFFIFQYGIVYKLKLQGSDTSFAVYGWSWVAFAMIIVLFKVFTFSQK-ISVNFQLLLRFIQGLSLLMALAGIIVAVVLTPLSVTDIFACVLAFIPTGWGILSIACAWKPVLKRMGMWKSIRSLARLYDALMGMLIFLPVALCSWFPFVSTFQTRMMFNQAFSRGLEISLILAG 1924          
BLAST of CN186425 vs. ExPASy Swiss-Prot
Match: CALSA_ARATH (Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=4)

HSP 1 Score: 171.014 bits (432), Expect = 6.813e-42
Identity = 85/200 (42.50%), Postives = 125/200 (62.50%), Query Frame = -3
Query:  203 ESWWEKEQQHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTKSTQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVXXXXXXXXXXXXXIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGG 802
            ESWWE+EQ H+     RG I+E +LSLRFFM+QYG+VY L  T+   +  +YG SWVV++ ++ L KG++      S  F  L  +   +                 ++  D+  C+L F+PTGW LL +A   K +++  G+WE+++   R Y+  MG+L+F+P+A L+WFPF+S FQ+R+LFNQAFSRGL+IS IL G
Sbjct: 1726 ESWWEEEQAHI--QTLRGRILETILSLRFFMFQYGIVYKLDLTRKNTSLALYGYSWVVLVVIVFLFKGVA------SITFIALIVVAIAMTD---------------LSIPDMFACVLGFIPTGWALLSLAITWKQVLRVLGLWETVREFGRIYDAAMGMLIFSPIALLSWFPFISTFQSRLLFNQAFSRGLEISIILAG 1902          
The following BLAST results are available for this feature:
BLAST of CN186425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CALS3_ARATH1.110e-8473.50Callose synthase 3 OS=Arabidopsis thaliana GN=CALS... [more]
CALS1_ARATH1.149e-8173.27Callose synthase 1 OS=Arabidopsis thaliana GN=CALS... [more]
CALS2_ARATH3.128e-7971.78Callose synthase 2 OS=Arabidopsis thaliana GN=CALS... [more]
CALS4_ARATH2.490e-6057.43Callose synthase 4 OS=Arabidopsis thaliana GN=CALS... [more]
CALS5_ARATH7.246e-6054.15Callose synthase 5 OS=Arabidopsis thaliana GN=CALS... [more]
CALS7_ARATH1.236e-5952.24Callose synthase 7 OS=Arabidopsis thaliana GN=CALS... [more]
CALS6_ARATH5.741e-5751.24Putative callose synthase 6 OS=Arabidopsis thalian... [more]
CALS8_ARATH2.113e-5149.75Putative callose synthase 8 OS=Arabidopsis thalian... [more]
CALS9_ARATH1.159e-4949.50Callose synthase 9 OS=Arabidopsis thaliana GN=CALS... [more]
CALSA_ARATH6.813e-4242.50Callose synthase 10 OS=Arabidopsis thaliana GN=CAL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186425 ID=CN186425; Name=CN186425; organism=Citrus sinensis; type=EST; length=804bp
CTTTTTTTTCCGTTATGATATTATAATTATAATATAAACACTTGTGCAGC
ATCCGTTCATCCTGTGGGTGTGGATACACACACACACACACATACAAATT
ACAAGATTGATTGATTGATTGACTGGGATGAGAGATATATCTATGTATGC
ATGCATTTATTCACTCCTTACTTTTGGAAGACCTGTCCTTCTCCTTCCTC
TGTCCTCCAAGAATACGAGAAATCTGTAAACCTCTACTGAATGCTTGGTT
GAATAGCATTCTTGTTTGAAACTCTGAAACAAATGGGAACCACGCCAAGA
ATGCAACCGGGGTGAATAGAAGTAATCCCATCACTATTTCATAACCACGA
GCAAGTGTCTTAATTGATTCCCAAATTCCACCACGTTGCATCAATGGCTT
ACAAGCTTGTGCGATCAGTAGTAGTCCCCATCCTGTTGGCATGAAGGCGA
GTATACACAGCAAGATATCTTTGAAGGTCATATGAGGGATTGCTATCAAA
ATGATGAAGATAGTAATAAATGAAATGAATACCAAACCCTTAATCATTCT
AAACAAAAGCTGGAAATTTGCACTGAATCGTCGCCTTCCAACAGACATTC
CCTTCACCAGCAACAATACGAAAATGATCACAACCCATGAAGCACCATAA
ACCAGAAAGTTCTGGGTACTCTTGGTAAAGCTCAAGTGATAAACGAGACC
ATATTGATACATGAAGAAGCGCAATGACAACAATATCTCAACAATGATGC
CGCGTTTCCCAGAGTAAAGGAGATGCTGTTGTTCCTTCTCCCACCAGGAT
TCCC
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