CN186417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.895e-47 Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNR YGGVLSGGAVRERIIRAF Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.031e-46 Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNR YGGVLSG AVRERIIRAF Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.540e-45 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRN RTVNR YGGVLSG AVRERIIRAF Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 9.651e-45 Identity = 86/95 (90.53%), Postives = 88/95 (92.63%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNR YGGVLSG AVRERIIRAF Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.170e-44 Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RN RTVNR YGGVLSG AVRERI+RAF Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.558e-21 Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 M QR+TYR+R +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RLS N +TV R YGG LS AV++RI+RAF Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.719e-21 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 M QR+TYR+R +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RLS N + V R YGG LS AV++RI+RAF Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34_AEDTR (60S ribosomal protein L34 OS=Aedes triseriatus GN=RpL34 PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRLT R+R SY TKSN+ RVV+TPGG+LVY KK+ + PKC +++ GI RP+E R R+ R +TV RT+GGVL +RERIIRAF Sbjct: 1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRLT R+R SY TKSN+ RVV+TPGG+LVY KK+ + PKC +++ GI RP+E R R+ R +TV RT+GGVL +RERIIRAF Sbjct: 1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93
BLAST of CN186417 vs. ExPASy Swiss-Prot
Match: RL34_DICDI (60S ribosomal protein L34 OS=Dictyostelium discoideum GN=rpl34 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.828e-20 Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = -1 Query: 246 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNHRTVNRTYGGVLSGGAVRERIIRAF 530 MVQRLTYR+R SY T SN ++VKTPGG+LVYQ K P+C G + GIP LRP +YK L ++ RTV+R YGG VR RI+RAF Sbjct: 1 MVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYK--NLPKSRRTVSRAYGGSKCAKCVRNRIVRAF 93 The following BLAST results are available for this feature:
BLAST of CN186417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186417 ID=CN186417; Name=CN186417; organism=Citrus sinensis; type=EST; length=557bpback to top |