CN186411

Overview
NameCN186411
Unique NameCN186411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12188 contig Csv1_Contig12188:479..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 434.491 bits (1116), Expect = 2.728e-121
Identity = 213/238 (89.50%), Postives = 220/238 (92.44%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGL DFSQE RCFQTVTCY+AVVNNLEDAHELIDTAVSTALKESKPVYIS+ CNLP IPHPTFSREPVPF+LSP+LSN MGL         FLNKAVKPVLV GPKMRVAKA +AFVEL+DACGYAVAVMPSAKGL PEHH HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:    1 AADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLQDFSQEPRCFQTVTCYRAVVNNLEDAHELIDTAVSTALKESKPVYISIGCNLPGIPHPTFSREPVPFALSPRLSNMMGLEAAVEAAAEFLNKAVKPVLVGGPKMRVAKASDAFVELSDACGYAVAVMPSAKGLFPEHHSHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 238
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 7.689e-116
Identity = 200/238 (84.03%), Postives = 216/238 (90.76%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHE IDTA++TAL+ESKPVY+S++CNLP +PHPTFSR+PVPF L+P+LSN+MGL         FLNKAVKPVLV GPK+RVAKA  AFV+L DA GYA AVMPSAKGLVPE HPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:   97 AADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 334
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 416.387 bits (1069), Expect = 7.689e-116
Identity = 200/238 (84.03%), Postives = 216/238 (90.76%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHE IDTA++TAL+ESKPVY+S++CNLP +PHPTFSR+PVPF L+P+LSN+MGL         FLNKAVKPVLV GPK+RVAKA  AFV+L DA GYA AVMPSAKGLVPE HPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:   97 AADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 334
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.004e-115
Identity = 198/238 (83.19%), Postives = 218/238 (91.60%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPN+NDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNL+DAHE ID A+STALKESKPVYIS++CNLPAIPHPTFSR+P+PFSLSP+LSN+ GL         FL+KAVKPV++ GPK+RVAKAC+AFVELAD+ GYA+AVM   KGLV E HPHFIGTYWGAV T++CAEIVESADAYLFAGPIFNDYS
Sbjct:   79 AADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNTNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLDDAHEQIDRAISTALKESKPVYISISCNLPAIPHPTFSRDPIPFSLSPRLSNKRGLEAAVDAAVTFLSKAVKPVMIGGPKLRVAKACDAFVELADSSGYAMAVMLQPKGLVAEQHPHFIGTYWGAVGTSYCAEIVESADAYLFAGPIFNDYS 316
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 9.399e-114
Identity = 191/238 (80.25%), Postives = 216/238 (90.76%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGY R++GVGACVVTFTVGGLS+LNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQEL+CFQT+TC+QAVVNNL+DAHELIDTA+STALKESKPVYIS+ CNLPAIPHPTF+R+PVPF L+P++SN+ GL         FLNKAVKPV+V GPK+RVAKA  AF+E A+A GY +AVMPS KGLVPE+HPHFIGTYWGAVST++C EIVESADAY+F GPIFNDYS
Sbjct:   84 AADGYGRAKGVGACVVTFTVGGLSILNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELQCFQTITCFQAVVNNLDDAHELIDTAISTALKESKPVYISIGCNLPAIPHPTFARDPVPFFLAPRVSNQAGLEAAVEEAAAFLNKAVKPVIVGGPKLRVAKAQKAFMEFAEASGYPIAVMPSGKGLVPENHPHFIGTYWGAVSTSYCGEIVESADAYVFVGPIFNDYS 321
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 407.142 bits (1045), Expect = 4.665e-113
Identity = 198/238 (83.19%), Postives = 214/238 (89.92%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQ +TCYQAVVNNL+DAH+ ID A+STA++ESKPVYISV+CNLPA+PHPTFSR+PVP+ LSP+LSN+  L         FL+KAVKPVLVAGPK+RVAKA  AFV+LADA GYAVA MPSAKGLVPE  P FIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:   77 AADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAALDATLAFLDKAVKPVLVAGPKLRVAKAGGAFVDLADASGYAVAAMPSAKGLVPETLPRFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 314
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.773e-112
Identity = 197/238 (82.77%), Postives = 214/238 (89.92%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQ +TCYQAVVNNL+DAH+ ID A+STA++ESKPVYISV+CNLPA+PHPTFSR+PVP+ LSP+LSN+  L         FL+KAVKPVLVAGPK+RVAKA  AFV+LADA G+AVA MPSAKGLVPE  P FIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:   77 AADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAALDATLAFLDKAVKPVLVAGPKLRVAKAGGAFVDLADASGHAVAAMPSAKGLVPETLPRFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 314
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.501e-111
Identity = 192/238 (80.67%), Postives = 210/238 (88.24%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQAV+NNL+DAHE IDTA++TAL+ESKPVYISV CNL  + HPTFSREPVP  +SP+LSN+  L         FLNKAVKPV+V GPK+RVAKA  AF  +A++ GY +AVMPSAKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYS
Sbjct:   96 AADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPIAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYS 333
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 1.960e-111
Identity = 191/238 (80.25%), Postives = 210/238 (88.24%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYARSRGVGAC VTFTVGGLSVLNAIAGAYSENLP++CIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQA++NNL+DAHE IDTA++TAL+ESKPVYISV+CNL  + HPTFSR+PVP  +SP+LSN+  L         FLNKAVKPV+V GPK+RVAKA  AF  +ADA GY  AVMP+AKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYS
Sbjct:  101 AADGYARSRGVGACAVTFTVGGLSVLNAIAGAYSENLPVVCIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAIINNLDDAHEQIDTAIATALRESKPVYISVSCNLAGLSHPTFSRDPVPMFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAREAFAAVADASGYPFAVMPAAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYS 338
[Close]
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 4.366e-111
Identity = 192/238 (80.67%), Postives = 209/238 (87.82%), Query Frame = 3 
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQT+TCYQAV+NNL+DAHE IDTA++TAL+ESKPVYISV CNL  + HPTFSREPVP  +SP+LSN+  L         FLNKAVKPV+V GPK+RVAKA  AF  +A++ GY  AVMPSAKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYS
Sbjct:   96 AADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYS 333
The following BLAST results are available for this feature:
BLAST of CN186411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_TOBAC2.728e-12189.50Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC2_ORYSJ7.689e-11684.03Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI7.689e-11684.03Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_TOBAC1.004e-11583.19Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_PEA9.399e-11480.25Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC3_ORYSI4.665e-11383.19Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC3_ORYSJ1.773e-11282.77Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_ORYSI1.501e-11180.67Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_MAIZE1.960e-11180.25Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC1_ORYSJ4.366e-11180.67Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186411 ID=CN186411; Name=CN186411; organism=Citrus sinensis; type=EST; length=719bp
GGATCGCTGCCGATGGGTACGCTCGCTCGCGTGGGGTCGGCGCCTGTGTC
GTGACCTTCACCGTTGGTGGGCTTAGCGTGCTTAACGCTATCGCCGGTGC
TTACAGTGAAAATCTGCCGTTGATTTGCATCGTTGGTGGCCCAAACTCCA
ATGATTACGGAACCAACAGGATCCTTCATCATACCATTGGCTTGCCTGAT
TTTAGCCAAGAACTCAGATGCTTTCAGACTGTCACCTGTTATCAGGCTGT
GGTGAATAACTTGGAGGATGCACATGAGTTGATTGATACGGCAGTATCAA
CTGCTTTGAAAGAAAGCAAGCCTGTTTATATCAGCGTTGCTTGTAACTTG
CCTGCGATTCCTCATCCTACTTTTAGCCGAGAGCCCGTTCCATTTTCGCT
TTCTCCCAAGTTGAGTAATGAGATGGGCTTGGAGGCTGCAGTTGAGGCAG
CAGCAGAGTTCTTGAACAAGGCGGTGAAACCAGTGTTGGTTGCTGGGCCC
AAAATGAGAGTGGCCAAGGCTTGCAATGCTTTCGTTGAGCTTGCTGATGC
TTGTGGCTACGCCGTTGCGGTGATGCCATCAGCGAAAGGGCTAGTACCAG
AGCACCATCCCCATTTTATTGGAACTTATTGGGGTGCCGTGAGCACTGCT
TTTTGTGCTGAAATTGTGGAATCTGCTGATGCTTATTTGTTTGCTGGACC
TATATTTAATGACTATAGC
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