CN186402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186402 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.155e-77 Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 2 Query: 158 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCDCGAVFSRRDSFITHRAFCDMLTKESAKVQS 655 KKKR+LPG PDP+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QR++KEV+KRVYVCPEKSCVHH PTRALGDLTGIKKHFCRKHGE YAVQSD+KAHSK CGT+EY+CDCG +FSRRDSFITHRAFCD L +E+A++ + Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNA 206
BLAST of CN186402 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.081e-75 Identity = 126/166 (75.90%), Postives = 145/166 (87.35%), Query Frame = 2 Query: 158 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCDCGAVFSRRDSFITHRAFCDMLTKESAKVQS 655 KKKR+LPG PDP+AEVIALSP TL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QR++KEV+KRVYVCPEK+CVHH +RALGDLTGIKKHFCRKHGE YAVQSD+KAHSK CGT+EY+CDCG +FSRRDSFITHRAFCD L +E+AK+ + Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINA 202
BLAST of CN186402 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.365e-75 Identity = 132/182 (72.53%), Postives = 152/182 (83.52%), Query Frame = 2 Query: 128 NQNAPPKSTN-KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEV-KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCDCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPN 667 N NA P S++ KKKR+ PGTPDPDA+VIALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QRS +EV KK+VY+CP K+CVHHD +RALGDLTGIKKH+ RKHGE YAVQSD+KAH+K CGT+EYKCDCG +FSR+DSFITHRAFCD LT+E A++ S N Sbjct: 42 NPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNN 223
BLAST of CN186402 vs. ExPASy Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15 Identity = 49/157 (31.21%), Postives = 70/157 (44.59%), Query Frame = 2 Query: 185 PDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRV----------YVCPEKSC---VHHDPTRALGDLTGIKKHFCRKH-GEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCDCGAVFSRRDSFITHRA 613 P E++ L + +LA + C IC KGF+RD NL++H RGH +K K K+ V Y CP C H + L + +K H+ R H + ++V +D K H K CG ++ C CG FSR+D H A Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIA 380
BLAST of CN186402 vs. ExPASy Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 41/135 (30.37%), Postives = 61/135 (45.19%), Query Frame = 2 Query: 227 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRV------YVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCDCGAVFSRRDSFITH 607 L+ F C +C K F R NLQ+H GH ++ S K + R Y C E ++ + H ++ L D ++ H+ RKHG AV+ D++ H K CG K + C CG+ F + S H Sbjct: 139 LIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCG-KRWVCVCGSDFKHKRSLKDH 272 The following BLAST results are available for this feature:
BLAST of CN186402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186402 ID=CN186402; Name=CN186402; organism=Citrus sinensis; type=EST; length=744bpback to top |