CN186400

Overview
NameCN186400
Unique NameCN186400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2536 contig Csv1_Contig2536:1..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K5_ARATH (Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47
Identity = 93/171 (54.39%), Postives = 116/171 (67.84%), Query Frame = -1
Query:  187 FSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 699
            + E +LA ++ QIL GL+YLH   I+HRDIKPSNLL+N+    VKIADFGVS+I+ +++D CNS VGT AYMSPER + D          GD+W L +++LE YL  FPF    Q  DWA+LMCAIC   PP  P  AS EFR F+ CCLQ +  KRW+A QLL HPF+ K
Sbjct:  159 WQEQELADLSRQILSGLAYLHRRHIVHRDIKPSNLLINSAK-NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGRYDGYAGDVWSLGVSILEFYLGRFPFAVSRQG-DWASLMCAICMSQPPEAPATASQEFRHFVSCCLQSDPPKRWSAQQLLQHPFILK 327          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K4_ARATH (Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana GN=MKK4 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47
Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = -1
Query:  187 FSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 699
            + E +LA ++ QIL GL+YLH   I+HRDIKPSNLL+N+    VKIADFGVS+I+ +++D CNS VGT AYMSPER + D          GDIW L +++LE YL  FPF    ++ DWA+LMCAIC   PP  P  ASPEFR FI CCLQ+E  KR +A QLL HPF+ +
Sbjct:  168 WKEQQLADLSRQILSGLAYLHSRHIVHRDIKPSNLLINSAK-NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNQGKYDGYAGDIWSLGVSILEFYLGRFPF-PVSRQGDWASLMCAICMSQPPEAPATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILR 336          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 79/171 (46.20%), Postives = 100/171 (58.48%), Query Frame = -1
Query:  187 LAHIASQILKGLSYLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWAT---LMCAICFGDPPSLPDG-ASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 684
            L+ I  Q+L+GL YLH  + IIHRD+KPSNLL+N+   +VKI DFGVS +M  +    N++VGT  YMSPER               DIW L L +LE     FP+  P Q   W +   LM AI    PP+LP G  SPE  SFI  CLQK+ + R +A +L+ HPFL K
Sbjct:  168 LSAIFRQVLQGLIYLHHDRHIIHRDLKPSNLLINHRG-EVKITDFGVSTVMTNTAGLANTFVGTYNYMSPERI-----VGNKYGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAIVDQPPPALPSGNFSPELSSFISTCLQKDPNSRSSAKELMEHPFLNK 332          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 79/179 (44.13%), Postives = 107/179 (59.78%), Query Frame = -1
Query:  172 EPKLAHIASQILKGLSYLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWAT---LMCAICFGDPPSLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 693
            EP LA +  Q+L+GL YLH  + +IHRDIKPSNLLVN    +VKI DFGVS ++  S+   +++VGT  YM+PER               DIW L L +LE  +  FP++ P +   W +   L+ AI    PPS P D  SPEF +FI  C+QK+ ++R +AS+LL HPF+ K    D
Sbjct:  166 EPYLAVLCKQVLEGLLYLHHERHVIHRDIKPSNLLVNRKG-EVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERIS-----GSSYDYKSDIWSLGLVILECAIGRFPYI-PSEGEGWLSFYELLEAIVDQPPPSAPADQFSPEFCAFISSCIQKDPAERMSASELLNHPFIKKFEDKD 337          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K6_ARATH (Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = -1
Query:  172 EPKLAHIASQILKGLSYLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQR---PDWATLMCAICFGDPPSLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 693
            EP LA +  Q+L GL YLH  + +IHRDIKPSNLLVN+   +VKI+DFGVS  +  S+   +++VGT  YMSPER               DIW L +++LE  +  FP+L+   +   P +  L+ AI    PP+ P D  SPEF SF+  C+QK+   R ++  LL+HPF+ K    D
Sbjct:  166 EPYLAVVCKQVLLGLVYLHNERHVIHRDIKPSNLLVNHKG-EVKISDFGVSASLASSMGQRDTFVGTYNYMSPERIS-----GSTYDYSSDIWSLGMSVLECAIGRFPYLESEDQQNPPSFYELLAAIVENPPPTAPSDQFSPEFCSFVSACIQKDPPARASSLDLLSHPFIKKFEDKD 338          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28
Identity = 77/179 (43.02%), Postives = 100/179 (55.87%), Query Frame = -1
Query:  172 EPKLAHIASQILKGLSYLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWAT---LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 693
            E  L+ I  ++L+GL Y+H  + IIHRD+KPSNLL+N+   +VKI DFGVSKI+  +    NS+VGT  YMSPER               DIW L L LLE     FP+  P  +  W++   L+ AI    PP  P    SPEF SFI  C+QK+   R +A +LL H F+     SD
Sbjct:  163 ENMLSAICKRVLRGLCYIHHERRIIHRDLKPSNLLINHRG-EVKITDFGVSKILTSTSSLANSFVGTYPYMSPERIS-----GSLYSNKSDIWSLGLVLLECATGKFPYTPPEHKKGWSSVYELVDAIVENPPPCAPSNLFSPEFCSFISQCVQKDPRDRKSAKELLEHKFVKMFEDSD 335          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: WIS1_SCHPO (Protein kinase wis1 OS=Schizosaccharomyces pombe GN=wis1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 74/177 (41.81%), Postives = 98/177 (55.37%), Query Frame = -1
Query:  172 EPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF--DPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 693
            E  LA  A  +++GL  L   H IIHRD+KP+N+LVN+N  QVK+ DFGVS  +  S+   N  +G  +YM+PER                 D+W L LT+LE+ L  +P+        +A L  AIC GDPPSLPD  SPE R F+  CL K  S R    +L  HP+L K + +D
Sbjct:  414 EGVLARTAYAVVQGLKTLKEEHNIIHRDVKPTNVLVNSNG-QVKLCDFGVSGNLVASISKTN--IGCQSYMAPERIRVGGPTNGVLTYTVQADVWSLGLTILEMALGAYPYPPESYTSIFAQLS-AICDGDPPSLPDSFSPEARDFVNKCLNKNPSLRPDYHELANHPWLLKYQNAD 586          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: SKH1_SCHPO (MAP kinase kinase skh1/pek1 OS=Schizosaccharomyces pombe GN=skh1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 71/172 (41.28%), Postives = 93/172 (54.07%), Query Frame = -1
Query:  193 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDW-ATLMCAICFGDPPSLPDGA----SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 693
            E  L  IA  +L GLSYLH  KIIHRDIKPSN+L+ +   QVK+ DFGVS  +  SL    ++ GT  YM+PER               DIW L LTL+E+ L+ FPF   G  P     L+  I    PP LP       S  F+ F+  CL K+ ++R    ++LTHP++
Sbjct:  180 ERPLGKIAFGVLSGLSYLHDRKIIHRDIKPSNILLTSKG-QVKLCDFGVSGELVNSL--AGTFTGTSYYMAPERIS-----GGSYTISSDIWSLGLTLMEVALNRFPFPPEGSPPPMPIELLSYIINMPPPLLPQEPGIKWSKSFQHFLCVCLDKDKTRRPGPQKMLTHPWV 343          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: PBS2_YEAST (MAP kinase kinase PBS2 OS=Saccharomyces cerevisiae GN=PBS2 PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = -1
Query:  172 EPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 693
            EP+LA IA+ ++ GL  L   H IIHRD+KP+N+L + N   VK+ DFGVS  +  SL   N  +G  +YM+PER               DIW L L++LE+ L  +P+  P    +  + + AI  G PP LP D  S + + F+  CLQK   +R T + L  HP+L K R  D
Sbjct:  458 EPQLAFIANAVIHGLKELKEQHNIIHRDVKPTNILCSANQGTVKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIKSLNPDRATYTVQSDIWSLGLSILEMALGRYPY-PPETYDNIFSQLSAIVDGPPPRLPSDKFSSDAQDFVSLCLQKIPERRPTYAALTEHPWLVKYRNQD 630          
BLAST of CN186400 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 62/173 (35.84%), Postives = 90/173 (52.02%), Query Frame = -1
Query:  181 FSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXGDIWPLRLTLLELYLDHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNR 699
            F E  + +    +LKGL YLH   +IHRDIK +N+L+N    + K++DFG +  + +  D   S VGT  +M+PE  +             DIW L  T++EL+  + P+            M  IC  D P LPD  S E  +F+E C  K   +R TA +LL+HP++ KNR
Sbjct:  171 FPESLICNYVENVLKGLVYLHQEGVIHRDIKAANILINKAG-EAKLSDFGTAGEIIKESDKRYSVVGTPYWMAPEVIE-----ISGHCQVSDIWSLGCTIIELFTSYPPYFDLNP----LGAMYRICQDDRPPLPDDISSELANFLERCFCKSTEERATAKELLSHPWITKNR 333          
The following BLAST results are available for this feature:
BLAST of CN186400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 396
Match NameE-valueIdentityDescription
M2K5_ARATH5.600e-4754.39Mitogen-activated protein kinase kinase 5 OS=Arabi... [more]
M2K4_ARATH5.600e-4754.97Mitogen-activated protein kinase kinase 4 OS=Arabi... [more]
M2K2_ARATH4.763e-3046.20Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
M2K1_ORYSJ4.763e-3044.13Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
M2K6_ARATH5.266e-2942.46Mitogen-activated protein kinase kinase 6 OS=Arabi... [more]
M2K1_ARATH5.822e-2843.02Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
WIS1_SCHPO9.295e-2641.81Protein kinase wis1 OS=Schizosaccharomyces pombe G... [more]
SKH1_SCHPO2.531e-2341.28MAP kinase kinase skh1/pek1 OS=Schizosaccharomyces... [more]
PBS2_YEAST2.531e-2339.20MAP kinase kinase PBS2 OS=Saccharomyces cerevisiae... [more]
Y0146_DICDI2.143e-2235.84Probable serine/threonine-protein kinase DDB_G0270... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186400 ID=CN186400; Name=CN186400; organism=Citrus sinensis; type=EST; length=699bp
TTTTTTTTTTTTTTTTTAACCAAAATACAAATCATTTCTCTGACTCACTA
AAAGAAGAGTTGAATAAAACAGCTAATGAAAACAAAACTTTATAATGTAC
AAAATTGAAATCTGATTCCGAAAGTATATACAAATACAAACTCTCATTGA
TTATTCGGGTTCGGGTCAGCAATCGGATCTTCGATTTTTGCACAGAAAAG
GATGAGTCAGAAGCTGAGAAGCCGTCCATCTTTTACTAAATTCCTTTTGC
AAACAACACTCAATGAAACTGCGAAATTCCGGAGATGCCCCGTCGGGCAA
ACTGGGCGGATCCCCGAAACATATAGCACACATGAGGGTGGCCCAATCGG
GTCTTTGACCTGGTTGAAGAAACGGAAAATGATCCAAATAAAGCTCCAAC
AAAGTAAGCCGCAGGGGCCAAATATCTCCAGCATAACCATTGTAATTCCC
TCCGTAGGCATCGGGGTCAAATCTTTCAGGACTCATATAAGCACAAGTAC
CCACATAAGAATTACAAGCATCCAAAGAACGGCACATGATTTTACTAACA
CCAAAATCGGCTATTTTCACTTGCATGTTGTTGTTATTAACCAGTAAATT
GGATGGCTTAATATCTCGATGAATGATTTTATGGCCATGCAAATAACTCA
AACCTTTGAGAATTTGAGAGGCTATGTGAGCAAGCTTAGGCTCCGAAAA
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