CX674984

Overview
NameCX674984
Unique NameCX674984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2103 contig Csv1_Contig2103:101..1019. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 3.592e-109
Identity = 195/242 (80.58%), Postives = 214/242 (88.43%), Query Frame = -3
Query:  192 EVEAKAPVPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 917
            E E+K  VPESV KK+KR EEWALAKKQELE +KK   E RKLI+NRAKQY+KE+ E+E+ LIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GKL+ QR ALTDNSI+++ LGK GIIC+EDLIHEIMTVGPHFKEANNFLWPF           KRNHYVEGGDAGNREN++NEL+RRMN
Sbjct:    3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 3.041e-108
Identity = 195/241 (80.91%), Postives = 213/241 (88.38%), Query Frame = -3
Query:  192 VEAKAPVPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 914
            VE+K  VPESV KK+KR EEWAL KKQ +E +KK   E+RKLI+ RA+QY+KE+AE+EK LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML RVEPYVTYG+PNLKSV+ELIYKRGYGKL+ QRIALTDNSI+E+ALGK GIIC EDLIHEI+TVGPHFKEANNFLWPF           KRNHYVEGGDAGNREN++NELIRRMN
Sbjct:    2 VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 9.782e-107
Identity = 192/240 (80.00%), Postives = 212/240 (88.33%), Query Frame = -3
Query:  192 EAKAPVPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 911
            E+K  VPESV KK KR EEWALAKK E   +KK  +E+RKLI+ RA+QYAKE+AE++  LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRGYGKL+ QRIALTDNSI+++ALGK GIIC+EDLIHEIMTVGPHFKEANNFLWPF           KRNHYVEGGDAGNREN++NEL+RRMN
Sbjct:    3 ESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.393e-75
Identity = 146/245 (59.59%), Postives = 181/245 (73.88%), Query Frame = -3
Query:  192 VEAKAP-VPESV*KKQKRNEEWA---LAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 914
            ++ K P VPE++ KK++   E     L KK  L+T +K +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS+I ++LGKFGIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:   29 LKKKVPAVPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.393e-75
Identity = 141/243 (58.02%), Postives = 178/243 (73.25%), Query Frame = -3
Query:  192 EVEAKAP-VPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 917
            E + K P VPE++ KK+K   E  + + ++    K  +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:    6 EKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 5.788e-75
Identity = 143/238 (60.08%), Postives = 177/238 (74.37%), Query Frame = -3
Query:  192 VPESV*KKQKRNEEWA---LAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 896
            VPE++ KK++   E     L KK  L+T +K +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS++ ++LGKFGIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:   26 VPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.560e-75
Identity = 140/243 (57.61%), Postives = 178/243 (73.25%), Query Frame = -3
Query:  192 EVEAKAP-VPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 917
            E + K P VPE++ KK++   E  + + ++    K  +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:    5 EEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.560e-75
Identity = 140/243 (57.61%), Postives = 178/243 (73.25%), Query Frame = -3
Query:  192 EVEAKAP-VPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 917
            E + K P VPE++ KK++   E  + + ++    K  +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:    5 EEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 247          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_HUMAN (60S ribosomal protein L7 OS=Homo sapiens GN=RPL7 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.684e-74
Identity = 137/235 (58.30%), Postives = 174/235 (74.04%), Query Frame = -3
Query:  192 VPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNRENYVNELIRRMN 896
            VPE++ KK++   E  + + ++    K  +   RKLIY +AK Y KE+ +  +  I++ R A+  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLIHEI TVG  FKEANNFLWPF           K  H+VEGGDAGNRE+ +N LIRRMN
Sbjct:   14 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248          
BLAST of CX674984 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.862e-73
Identity = 137/236 (58.05%), Postives = 178/236 (75.42%), Query Frame = -3
Query:  192 VPESV*KKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNRENYVNELIRRMN 896
            VPE++ KK+K  E+    ++ E+E  K    E R +I+ RA+ Y KE+ + E+  I+L+R AK  G F++  EAKL+F+IRI+GIN I PK +KILQLLRL QI NGVF++V KAT  M+  VEP+V YGYPNLKSV+ELIYKRGYGK++KQR+ALTDNSIIE+ LGK+GIICMEDLIHEI TVGP+FK+A+NFLWPF           ++  H++EGGD GNRE ++N LIR+MN
Sbjct:   13 VPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248          
The following BLAST results are available for this feature:
BLAST of CX674984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL74_ARATH3.592e-10980.5860S ribosomal protein L7-4 OS=Arabidopsis thaliana... [more]
RL72_ARATH3.041e-10880.9160S ribosomal protein L7-2 OS=Arabidopsis thaliana... [more]
RL73_ARATH9.782e-10780.0060S ribosomal protein L7-3 OS=Arabidopsis thaliana... [more]
RL7_MOUSE3.393e-7559.5960S ribosomal protein L7 OS=Mus musculus GN=Rpl7 P... [more]
RL7_BOVIN3.393e-7558.0260S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=... [more]
RL7_RAT5.788e-7560.0860S ribosomal protein L7 OS=Rattus norvegicus GN=R... [more]
RL7_PONAB7.560e-7557.6160S ribosomal protein L7 OS=Pongo abelii GN=RPL7 P... [more]
RL7_MACFA7.560e-7557.6160S ribosomal protein L7 OS=Macaca fascicularis GN... [more]
RL7_HUMAN1.684e-7458.3060S ribosomal protein L7 OS=Homo sapiens GN=RPL7 P... [more]
RL7_NEUCR1.862e-7358.0560S ribosomal protein L7 OS=Neurospora crassa GN=r... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H05-O9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674984 ID=CX674984; Name=CX674984; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTGTTTTTTTTCCAATAACATCTCATGATCCATTGTTTAAAACAAA
AACTGTTTCCACATTAAAAGGGGGGACTAAAATTTCGTTTGCTACGGTAC
CAACAATATCTTAGCATAAGAACCTCAAAACTCTTAAATAATGAAACACC
TCAAAACTCTAAATAATCATCAAAATAATGCGAACTGCCTAGTTCATTCT
TCTGATCAGTTCATTGACGTAGTTCTCACGGTTTCCAGCATCACCACCCT
CGACATAGTGGTTCCTCTTCTTCTTCAGGCCACCCAATGGTGCCTTGAGC
TTAAATGGCCATAAAAAGTTGTTAGCCTCCTTAAAATGAGGTCCCACTGT
CATAATCTCATGGATCAGGTCTTCCATGCAGATGATACCGAACTTGCCCA
AAGCCTTCTCAATAATTGAGTTATCAGTCAAAGCAATTCTCTGCTTATCT
AGCTTTCCATATCCCCTCTTGTAAATGAGCTCCCTAACACTCTTCAAATT
GGGGTATCCATAGGTGACGTAAGGTTCAACCCTATGAAGCATGTTCATGG
TAGCTTTGTTCACTTTAAGAAAAACTCCATTGAAGATCTGTCTTAAACGT
AAAAGCTGCAAAATCTTCTTTGTCTTTGGGTCAATGGCATTGATACCACG
GATACGGATGATAAACAAAAGCTTAGCTTCAGGGTCAACATAAAACCCTC
CTTTCAATTTAGCTTCACGCTTCAATTGAATCAACACCTTTTCCTGCTCA
GCAAACTCCTTTGCATACTGCTTAGCCCTATTGTAAATCAGCTTCCTACT
CTCGAGCTTGTTCTTCTTGGAAGTTTCAAGCTCCTGCTTCTTTGCCAAAG
CCCATTCCTCATTCCTCTTCTGCTTCTTTCAGACAGACTCTGGAACTGGC
GCCTTGGCTTCTACTTCAG
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