CN186399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.957e-61 Identity = 112/135 (82.96%), Postives = 119/135 (88.15%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 688 KIRLNMQRVMQNNAAVFRTQETLEEGC+LI KAWES+HDVK++DRSLIWN+D NACITMHSAEARKESRGAHAREDFTKRDDE WMKH+LGYWENEKVRL YRPVHMNTLD E+ESFPPKARVY Sbjct: 496 KIRLNMQRVMQNNAAVFRTQETLEEGCKLITKAWESYHDVKISDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEQWMKHSLGYWENEKVRLAYRPVHMNTLDSEVESFPPKARVY 630
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.816e-58 Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 685 IRLNMQR+MQNNAAVFRTQETLEEGCQLIDKAWESF DV++ DRS+IWN+D NA ITMHSAEARKESRGAHAREDFTKR+D WMKHTLGYWE+EKVRLDYRPVHM+TLDDEI++FPPKARVY Sbjct: 501 IRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKVRLDYRPVHMDTLDDEIDTFPPKARVY 634
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57 Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 688 KIRLNMQRVMQNNAAVFRTQETLEEGC LIDK W+SF DVK+TDRS+IWN+D NACITMHSAEARKESRGAHAREDFTKRDD NWMKHTLGYWE V+L+YRPVHM TLDDE+++FPPK RVY Sbjct: 498 KIRLNMQRVMQNNAAVFRTQETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDANWMKHTLGYWEEGNVKLEYRPVHMKTLDDEVDTFPPKPRVY 632
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_DICDI (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dictyostelium discoideum GN=sdhA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.024e-34 Identity = 78/139 (56.12%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESF-HDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE--NEKVRLDYRPVHMNTLD-DEIESFPPKARVY 688 +IRL MQ++MQ NAAVFR + L+EG +LIDK S +D+K TDR++IWNTD A +TMHSAEARKESRGAHARED+ +RDD NWMKHTL Y + KV L+YRPV TLD E+E+ P RVY Sbjct: 488 EIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIESLELQNLMTQAVLTMHSAEARKESRGAHAREDYKERDDANWMKHTLSYLDVNTGKVTLNYRPVVSETLDQSEMETIKPFKRVY 626
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 69/135 (51.11%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 685 +RL MQR MQ++A+VFRTQE L+EG ++I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+D+ WM+HTL G E KV LDY+PV + TL DE+++ PP RVY Sbjct: 462 LRLKMQRTMQSHASVFRTQEVLDEGAEMISEIRSGYKDIKVNDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDKEWMQHTLSGVDEAGKVVLDYKPVTLTTLSDEVKAIPPAKRVY 596
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RICCN (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii GN=sdhA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33 Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = -2 Query: 284 KIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 688 ++RL MQR MQ++A+VFRTQE L+EG +I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+DE+WMKHTL E KV LDY+PV + TL DE+ + PP RVY Sbjct: 461 ELRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRSGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDEDWMKHTLSSIDEAGKVVLDYKPVTLTTLTDEVTAVPPVKRVY 596
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RICFE (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia felis GN=sdhA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 685 +RL MQR MQ++A+VFRTQE L+EG +I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+D +WMKHTL E K+ +DY+PV + TL DEI + PP RVY Sbjct: 462 LRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRNGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDGDWMKHTLSSIDEAGKIVIDYKPVTLTTLTDEISAIPPAKRVY 596
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 685 +RL MQR MQ++ +VFRTQE L+EG ++I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+D +W+KHTL ++ ++ LDY+PV + TL DEI + PP R+Y Sbjct: 462 LRLQMQRTMQSHVSVFRTQELLDEGARMISEIRNRYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDIDWIKHTLSSIDDSGQIILDYKPVTLTTLTDEISTIPPVKRIY 596
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_RICPR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia prowazekii GN=sdhA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29 Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 685 +RL MQR MQ++ +VFRTQ+ L+EG +I + + D+K+ D+SLIWN+D A +T+ SA ARKESRGAHARED+ R+D +W+KHTL ++ KV LDY+PV + TL D I + PP RVY Sbjct: 462 LRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVCSAAARKESRGAHAREDYPDRNDRDWIKHTLSSIDDSGKVVLDYKPVTLTTLTDAISAIPPVKRVY 596
BLAST of CN186399 vs. ExPASy Swiss-Prot
Match: DHSA_PARDE (Succinate dehydrogenase flavoprotein subunit OS=Paracoccus denitrificans GN=sdhA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.934e-28 Identity = 70/140 (50.00%), Postives = 87/140 (62.14%), Query Frame = -2 Query: 284 IRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMN--TLDDE----IESFPPKARVY 685 +RL MQR MQ +AAVFRT +TL EG + D+K+TDRSLIWN+D NA T+ +AEARKESRGAHA ED+ +RDD NW KH+L + E V+L YRPVH+ T DE ++ PKARVY Sbjct: 461 LRLEMQRTMQADAAVFRTDKTLAEGVDKMRVIAGKLSDLKVTDRSLIWNSDLMETLELTNLMPNALATIVAAEARKESRGAHAHEDYPERDDANWRKHSLAWIEGNDVKLAYRPVHLEPLTRQDEGGIDLKKIAPKARVY 600 The following BLAST results are available for this feature:
BLAST of CN186399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186399 ID=CN186399; Name=CN186399; organism=Citrus sinensis; type=EST; length=689bpback to top |