CN186398

Overview
NameCN186398
Unique NameCN186398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12355 contig Csv1_Contig12355:28..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 2.757e-113
Identity = 195/226 (86.28%), Postives = 209/226 (92.48%), Query Frame = 1
Query:   43 MALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            MA P+VD EYLKEI KARR+LR+LIA KNCAPIMLRLAWHDAGTYD  +KTGGPNGSIRNEEE++HG+N+GLKIALD CE VKAKHPKITYADLYQLAGVVAVEVTGGP + FVPGRKDS + PKEGRLPDAK+G  HLRD+FYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWT+EPLKFDNSYFVELL GESEGLL+LPTDK LLEDPEFRR VELYAKDED
Sbjct:    1 MAAPIVDAEYLKEITKARRELRSLIANKNCAPIMLRLAWHDAGTYDAQSKTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKDSNVCPKEGRLPDAKQGFQHLRDVFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDED 226          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.416e-109
Identity = 188/226 (83.19%), Postives = 208/226 (92.04%), Query Frame = 1
Query:   43 MALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            MA PVVD EYL+++D+ARR LRALI+ K CAPIMLRLAWHDAGTYDVNTKTGG NGSIR EEEY+HGSN GLKIA+D  E +KAK PKITYADLYQLAGVVAVEVTGGPTV+F+PGR+DS + P+EGRLPDAK+GA HLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGF+G WT+EPLKFDNSYF+ELL GESEGLL+LPTDKALLEDP FRRYV+LYA+DED
Sbjct:    1 MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGTYDVNTKTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDED 226          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.791e-104
Identity = 179/225 (79.56%), Postives = 202/225 (89.78%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            A PVVD EY+ E+++ARRDLRALIA K+CAPIMLRLAWHDAGTYD  TKTGGPNGSIR  +EYSH +N G+KIA+D  E +K KHPKITYADLYQLAGVVAVEVTGGPT+D+VPGR+DS  SP+EGRLPDAK+GA HLR++FYRMGLSDKDIVALSGGHTLG+A PERSGFDG WT++PLKFDNSYF+ELL   SEGLL+LPTDKAL+EDP FRRYVELYAKDED
Sbjct:    3 AAPVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKATKTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDED 227          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.990e-104
Identity = 178/225 (79.11%), Postives = 202/225 (89.78%), Query Frame = 1
Query:   46 ALPVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            A PVVD EY+ E+++ARRDLRALIA K+CAPIMLRLAWHDAGTYD  TKTGGPNGSIR  +EYSH +N G+KIA+D  E +K +HPKITYADLYQLAGVVAVEVTGGPT+D+VPGR+DS  SP+EGRLPDAK+GA HLR++FYRMGLSDKDIVALSGGHTLG+A PERSGFDG WT++PLKFDNSYF+ELL   SEGLL+LPTDKAL+EDP FRRYVELYAKDED
Sbjct:    3 AAPVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKATKTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDED 227          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 9.541e-90
Identity = 160/221 (72.40%), Postives = 184/221 (83.26%), Query Frame = 1
Query:   58 VDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            VD EYLKEI+K RRDLRALI+ +NCAPIMLRLAWHDAGTYD   KTGG NGSIR +EE +   N GL+ A+ FCEEVKAKHP+++YADLYQLAGVVAVEVTGGP + F PGRKD+  S  +G LP+   GA HLR +F RMGL D+DIVALSGGHTLGRAH ERS F+GPWT++PLKFDNSYFVELL GE+ GLLQL TDKALL+DP+F  +V+LYAKDED
Sbjct:    5 VDAEYLKEIEKTRRDLRALISSRNCAPIMLRLAWHDAGTYDAKKKTGGANGSIRFKEELNRPHNKGLEKAVAFCEEVKAKHPRVSYADLYQLAGVVAVEVTGGPAIPFTPGRKDAD-SADDGELPNPNEGASHLRTLFSRMGLLDRDIVALSGGHTLGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDED 224          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.130e-81
Identity = 147/223 (65.92%), Postives = 176/223 (78.92%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDE 717
            PVV  EY + ++KAR+ LRALIA K+CAP+MLRLAWH AGT+DV++KTGGP G+++   E SH +N GL IA+   E +K + P I+YAD YQLAGVVAVEV+GGP V F PGR+D    P EGRLPDA +G+ HLR +F  +MGLSD+DIVALSGGHTLGR H ERSGF+GPWTR PL+FDNSYF ELL+G+ EGLLQLP+DKALL DP FR  VE YA DE
Sbjct:    6 PVVSAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVSSKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADE 228          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.803e-80
Identity = 146/223 (65.47%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDE 717
            PVV  EY + ++KAR+ LRALIA K+CAP+MLRLAWH AGT+DV++KTGGP G+++   E SH +N GL IA+   E +K + P I+YAD YQLAGVVAVEV+GGP V F PGR+D    P EGRLPDA +G+ HLR +F  +MGLSD+DIVALSGGHTLGR H ERSGF+GPWTR PL+FDNSYF ELL+G+ EGLLQLP+DKALL DP F   VE YA DE
Sbjct:    6 PVVSAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGTFDVSSKTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADE 228          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 297.36 bits (760), Expect = 5.247e-80
Identity = 144/223 (64.57%), Postives = 170/223 (76.23%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            P V  EY K + + +R LR LIA K+CAPI+LRLAWH AGT+DV TKTGGP G+IR+ +E +H +NNGL IA+   + +K   P ++YAD YQLAGVVAVE+TGGP + F PGR D    P EGRLP A +G  HLRD+F RMGL+DKDIVALSGGHTLGR H ERSGF+G WT  PL FDNSYF E+L+GE EGLLQLPTDKALL+DP F  +VE YA DED
Sbjct:    7 PEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADED 229          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.950e-80
Identity = 144/224 (64.29%), Postives = 172/224 (76.79%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIFYR-MGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            P V  +Y K I+KA+R LR  IA K CAP++LRLAWH AGT+D  TKTGGP G+I+++ E +HG+NNGL IA+   E +K + P ++YAD YQLAGVVAVE+TGGP V F PGR+D    P EGRLPDA +G+ HLRD+F + MGLSD+DIVALSGGHT+G AH ERSGF+GPWT  PL FDNSYF ELL GE +GLLQLP+DKALL D  FR  VE YA DED
Sbjct:    6 PTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGTFDSKTKTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADED 229          
BLAST of CN186398 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.401e-79
Identity = 145/224 (64.73%), Postives = 172/224 (76.79%), Query Frame = 1
Query:   52 PVVDTEYLKEIDKARRDLRALIAYKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTVDFVPGRKDSKISPKEGRLPDAKRGAPHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLPTDKALLEDPEFRRYVELYAKDED 720
            P V  EYL  + KA+R LR LIA KNCAP+MLRLAWH AGT+DV+++TGGP G+++N  E SH +N GL IA+   + +K + P ++YAD YQLAGVVAVEVTGGP V F PGR+D    P EGRLPDA +G+ HLR +F  +MGLSDKDIVALSGGHTLGR H ERSGF+G WT  PL FDNSYF EL++GE EGLLQLP+DKAL+ DP FR  VE YA DED
Sbjct:    7 PTVSDEYLAAVGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVSSRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADED 230          
The following BLAST results are available for this feature:
BLAST of CN186398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
APX3_ARATH2.757e-11386.28L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ1.416e-10983.19Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ1.791e-10479.56Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI3.990e-10479.11Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX5_ARATH9.541e-9072.40L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
APX1_ORYSJ2.130e-8165.92L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI1.803e-8065.47L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ARATH5.247e-8064.57L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX1_PEA8.950e-8064.29L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX2_ORYSJ3.401e-7964.73L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186398 ID=CN186398; Name=CN186398; organism=Citrus sinensis; type=EST; length=720bp
GAGGGTAAACTGTCAAAAGGTCGTTACAGAAAAAGAGCTCCGATGGCTTT
ACCGGTCGTTGACACAGAGTACCTGAAGGAGATCGACAAGGCTCGTCGCG
ATCTCCGCGCTCTTATCGCTTACAAGAACTGTGCTCCAATCATGCTCCGT
CTAGCGTGGCACGACGCGGGAACATATGACGTGAACACGAAGACTGGTGG
ACCAAATGGCTCGATAAGGAACGAAGAGGAGTACTCTCATGGCTCCAACA
ATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGAAGTGAAGGCTAAACAT
CCAAAAATAACATATGCAGACCTATACCAGCTTGCGGGTGTTGTTGCAGT
TGAGGTCACTGGAGGTCCTACAGTCGACTTTGTTCCTGGTAGAAAGGATT
CAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGATGCCAAACGAGGTGCA
CCTCATCTGAGGGATATCTTTTATCGGATGGGTCTGTCTGACAAGGATAT
AGTGGCACTCTCAGGGGGCCATACTTTGGGAAGGGCACATCCAGAGAGAT
CAGGTTTTGACGGCCCTTGGACCAGGGAGCCTCTGAAATTTGATAACTCA
TACTTTGTGGAGTTGCTGAATGGGGAATCAGAAGGATTACTGCAACTTCC
AACAGACAAGGCTTTATTAGAAGACCCTGAGTTCCGTCGTTATGTTGAGT
TGTATGCAAAGGATGAGGAT
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