CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5463 contig Csv1_Contig5463:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.151e-92
Identity = 165/233 (70.82%), Postives = 195/233 (83.69%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDT-FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTN 819
            S VRLFHKHGAKVCI D+QD+LG +VC+SL  G   +T FF H DV  E+D+ +AVD  V+ FGTLDI++NNAG+ GAPCPDIR   LSEFE  FD+NVKG F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPH+Y GSKHAVLGL ++VAAELG++GIRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G ELT +DVANAVLFLASD++RYISG N
Sbjct:   35 SIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDN 267          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 113/230 (49.13%), Postives = 154/230 (66.96%), Query Frame = 1
Query:  133 TVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT-ELTANDVANAVLFLASDEARYISGTN 819
            T RLF KHGA+V +AD+QD LG  +   LG +  ++  HCDVT E DV +AVD  V +FG LD+M NNAG+SG PC  + E    +FE+V  +N+ G F G KHAAR+M P  +G+IIS  S++ ++ G   HAYT SKHA++G  +N A ELG++GIRVNCVSP  VAT LA A +  ++   +A+      +A +AN++G   L A+D+A A LFLASD+ RY+SG N
Sbjct:   33 TARLFVKHGARVVVADIQDELGASLVAELGPDASSYV-HCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAI------MANSANLKGAGALKADDIAAAALFLASDDGRYVSGQN 255          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49
Identity = 113/251 (45.02%), Postives = 146/251 (58.17%), Query Frame = 1
Query:  136 VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREA---DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA--HLPEEERTEDA-----------------MVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTN 819
            VRLF KHGA+V IAD+ D  G+ +  +LG  P   F  CDV+ E+DV  AVD  + + G  LD+  NNAG+ G      R     D +EF++V  +N  G   GMKHAAR M P+  G+I+S+ SVA  +GGLGPHAYT SKHA++GL KN A EL  +G+RVNCVSP+ VAT + +       ++ T DA                 +      V   A ++G  L   D+A AVLFLASDEARYISG N
Sbjct:   72 VRLFAKHGARVVIADIDDAAGEALASALG--PQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHN 320          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 86/230 (37.39%), Postives = 123/230 (53.48%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            +TV L    GA V +AD+ D  G+ V  + GG+   F   CD+ +EEDV + V  T+  FG LD   NNA I  A  P + E  L  F +  DINV G F  MK+    MI + TKG+I++  S AG +G      Y G+KHAV+GL +  AA+ GK+GIRVN + P AV T       P  +R  D   G   ++  + +  G     ++ A A ++L SD A +++G+
Sbjct:   21 ATVELLVASGANVPVADINDEAGEAVVATSGGKAAYF--RCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLP-LAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRT-------PMLQRAMDNDAGLEPYL-NSIHPIGRFSEPHEQAQAAVWLLSDAASFVTGS 239          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.405e-27
Identity = 80/231 (34.63%), Postives = 124/231 (53.68%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            + V+ F    A V +AD+ +  G+ + +    +    F H D+T E    +A+   V+KFG LD+++NNAGI   AP   I E +LS + KV ++N+ G+F   KHA + M+   KG II+ CSV G +      AY  SK  VL L +++A +  K+ IRVNCV P  + T L   + L   E T + +   +  V     +   E    ++AN +LFLASD + Y++G+
Sbjct:   20 AAVQAFLNQQANVVVADIDEAQGEAMIRKENNDR-LHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAP---IHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPE----EIANVMLFLASDLSSYMTGS 242          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 82/228 (35.96%), Postives = 119/228 (52.19%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            S VR     GAKV   D+ D  G+ V   L       + H DVT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN + P  V T +    +PE+         F+  + R A          +V+N V++LASDE+ Y +G
Sbjct:   22 SHVRAMVAEGAKVVFGDILDEEGKAVAAELADAAR--YVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGT--IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT-DWVPEDI--------FQTALGRAAE-------PVEVSNLVVYLASDESSYSTG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26
Identity = 82/228 (35.96%), Postives = 119/228 (52.19%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            S VR     GAKV   D+ D  G+ V   L       + H DVT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN + P  V T +    +PE+         F+  + R A          +V+N V++LASDE+ Y +G
Sbjct:   22 SHVRAMVAEGAKVVFGDILDEEGKAVAAELADAAR--YVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGT--IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT-DWVPEDI--------FQTALGRAAE-------PVEVSNLVVYLASDESSYSTG 229          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.115e-26
Identity = 73/225 (32.44%), Postives = 124/225 (55.11%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVANAVLFLASDEARYISGT 816
            F   GA+V + DV     +   + LGG+       CDVT+ +DV   +   VE+FG LD+MVNNAGI+      +R     +F++V  +++KG ++G + AA IM  + +G I+++ SV+G +G +G   Y+ +K  ++G+ K  A EL   GIRVN ++P  + + +  A +P+           R +  + A +  G     ++VA+  +FLASD + Y++GT
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRD--ATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEA-MPQ-----------RIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGT 237          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.115e-26
Identity = 73/225 (32.44%), Postives = 124/225 (55.11%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVANAVLFLASDEARYISGT 816
            F   GA+V + DV     +   + LGG+       CDVT+ +DV   +   VE+FG LD+MVNNAGI+      +R     +F++V  +++KG ++G + AA IM  + +G I+++ SV+G +G +G   Y+ +K  ++G+ K  A EL   GIRVN ++P  + + +  A +P+           R +  + A +  G     ++VA+  +FLASD + Y++GT
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRD--ATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEA-MPQ-----------RIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGT 237          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.867e-25
Identity = 76/223 (34.08%), Postives = 114/223 (51.12%), Query Frame = 1
Query:  157 GAKVCIADVQ-DNLGQQVCQSLGGEPDT--FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            GAK+ + DV  + L       L   PD        DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV  IN++GVF G++   +IM  Q  G +++  SV G  G      Y  +KH V+GL +N A E G+YGIR+N ++P A+ T +    + + +  E+       F+  N + +  E  A ++A  V FL SD+A Y++ T
Sbjct:   37 GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD-PENPRKAAEEFIQVNPSKRYGE--APEIAAVVAFLLSDDASYVNAT 255          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ABA2_ARATH1.151e-9270.82Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
MOMAS_ORYSJ2.962e-5649.13Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE4.580e-4945.02Sex determination protein tasselseed-2 OS=Zea mays... [more]
LINC_PSEPA5.264e-2937.392,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
BACC2_BACSU8.405e-2734.63Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
HSD_MYCTU1.434e-2635.963-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO1.434e-2635.963-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
Y1385_MYCBO7.115e-2632.44Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU7.115e-2632.44Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
LVR_LEIAQ7.867e-2534.08Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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