CN186386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45 Identity = 85/158 (53.80%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 271 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAV 744 +PC+ ++D G + K SKE +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+ GEEAI+IGSAAAL D I QYRE GV +WRG+T+ NQ N+ D GKGRQMP+H+GS+K+N TISSP+ TQLPQAVG +Y+ K+ + C + Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQLPQAVGSSYAQKLAGEKNCTI 221
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.934e-44 Identity = 82/171 (47.95%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + +E +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 220
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44 Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44 Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44 Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 224
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.875e-43 Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L MD +LYE+QR+GR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F +Q + N D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 221
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.455e-43 Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 1 Query: 205 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLK 717 FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG ++ +++TISSP+ATQ+PQAVG AY+ K Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAK 234
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 253 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAV--GVAYSLKMEKKDACA 741 E+S+ RVLDD+G + G Q+S E ++ M+ ++ D+ + AQRQ + SFY+ +GEEAI AL D P YR+ G+L+ R Y L Q+ +N+AD KGRQ+PI Y SK+ + +IS +ATQ QAV G+A ++K + + A A Sbjct: 46 ETSDLAYSLVRVLDDDGHAV-GPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASA 209
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 334 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKG-RQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACA 741 ++ + AV MY M+ + +D ++ R G+ F ++ G+EA +G+A AL + D++LP YR+ GV+L G T + FA AD G RQMP H+G KK +T SSP+ TQ+P AVG+A + +MEKKD A Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGRMEKKDIAA 148
BLAST of CN186386 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 283 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVG--VAYSLKMEKKDACA 741 RVLD+ G+ +G + + ++ + M+ ++ DS + AQRQ + SFY+ ++GEEAI G A AL+ D P YR+ +L+ R +L + Q+ +N+ D KGRQ+PI Y ++ + TIS +ATQ QAVG +A ++K + K A A Sbjct: 56 RVLDEQGDA-QGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASA 209 The following BLAST results are available for this feature:
BLAST of CN186386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186386 ID=CN186386; Name=CN186386; organism=Citrus sinensis; type=EST; length=746bpback to top |