CN186372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.396e-70 Identity = 141/255 (55.29%), Postives = 168/255 (65.88%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVKEAXXXXXXXXXXXXXXXFSDGDEESGVRHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEGFA 765 LKFVAIASIL++G GVAIPLIG++RRFL+T+G+LFVA KAFAAGVILATGFVHML+GG+EAL NPCLP+FPWSKFPFPGFFAMVA+L TLL+DF+GTQYYERKQ +A E + + +VPV+ + + KVFGEE+GGG+HIVG+ C+GH + D E+G RHVVVSQ+LE PCTIRPLIAALSFHQFFEGFA Sbjct: 27 LKFVAIASILLAGAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCLPDFPWSKFPFPGFFAMVAALATLLVDFMGTQYYERKQERNQAATE-----AAAGSEEIAVVPVVGERVTDNKVFGEEDGGGIHIVGIRAHAAHHRHSHSNSHGTCDGHA----------HGHSHGHMHGNSDVENGARHVVVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFA 266
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 5.701e-67 Identity = 141/260 (54.23%), Postives = 167/260 (64.23%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQ--GLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVK-EAXXXXXXXXXXXXXXXFSDG--DEESGVRHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEGFA 765 LKFVAIASIL++G GV IPLIG++RRFL+TDG+LFV KAFAAGVILATGFVHML+GG+EAL NPCLP+FPWSKFPFPGFFAM+A+L+TL +DF+GTQYYERKQ + + E GR E S +VP++ + KVFGEE+ GG+HIVG+ CEGH K + G D +G RH+VVSQVLE PCTIRPLIAALSFHQFFEGFA Sbjct: 27 LKFVAIASILLAGAAGVTIPLIGRNRRFLQTDGNLFVTAKAFAAGVILATGFVHMLAGGTEALKNPCLPDFPWSKFPFPGFFAMIAALITLFVDFMGTQYYERKQEREASESVEPFGR-----EQSPGIVVPMIGEGTNDGKVFGEEDSGGIHIVGIHAHAAHHRHSHPPGHDSCEGHSKIDIGHAHAHGHGHGHGHGHVHGGLDAVNGARHIVVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFA 281
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.927e-48 Identity = 121/254 (47.64%), Postives = 142/254 (55.91%), Query Frame = 1 Query: 16 IASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQG--LTRATEEQGRVRSV--DEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVKEAXXXXXXXXXXXXXXXFSDGDEESGVRHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEGFA 765 +ASILISG GV+IPL+G L +G L KAFAAGVILATGFVHMLSGGS+AL +PCLPEFPW FPFP FFAMVA+LLTLL DF+ T YYERKQ + ++ E G SV D +SG ++D +E+GG +HIVGM EG + D +SGVRHVVVSQ+LE PCTIRPL+ ALSFHQFFEGFA Sbjct: 1 MASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEFPWKMFPFPEFFAMVAALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSDPGLESGF-----LRD-------QEDGGALHIVGM---RAHAEHHRHSLSMGAEGFEALSKRSGVSGHGHGHSHGHGDVGLDSGVRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFA 236
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 87/253 (34.39%), Postives = 113/253 (44.66%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVKEAXXXXXXXXXXXXXXXFSDGDEESGVRHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEG 759 LK +IA +L++G VGV++PLIGK L+ + +F KAFAAGVIL TGFVH+L E L +PCL + KFPF GF AM++++ TL++D T YY+R+ + G K NV V EE G +HI GH + G E R +V SQVLE TI+PL+AALSFHQFFEG Sbjct: 50 LKLGSIALLLVAGGVGVSLPLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQ----HFSNNHGS------------------KQVNVVVDEEEHAGHVHI----------------HTHASHGH--------------------THGSTELIRRRIV-SQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEG 243
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERK 312 LK VAI +IL++ ++GVA PL ++ FL DG +F+ K FA+G+IL TGF+H+L E L +PCL + PW KFPF GF AM++ L+TL +D + T Y +K Sbjct: 50 LKIVAIVAILVTSMIGVAAPLFSRYVTFLHPDGKIFMIIKCFASGIILGTGFMHVLPDSFEMLSSPCLEDNPWHKFPFTGFVAMLSGLVTLAIDSIATSLYTKK 153
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 72/253 (28.46%), Postives = 108/253 (42.69%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVKEAXXXXXXXXXXXXXXXFSDGDEESGVRHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEG 759 LK VAI +IL + ++GV PL ++ FL+ DG+ F+ K F++G+IL TGF+H+L E L + CL + PW KFPF GF AM++ L+TL +D + T Y K + +E+ +G ++ +H+VG GH + D+ +R+ V++ VLE CTI+ LI AL FH FEG Sbjct: 46 LKIVAIVAILTTSLIGVTSPLFSRYISFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDSFEMLSSKCLSDNPWHKFPFAGFVAMMSGLVTLAIDSITTSLYTGKNSVGPVPDEE---------------------------YGIDQEKAIHMVG---------------HNHSHGH----------------GVVLATKDDGQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEG 240
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.920e-22 Identity = 84/253 (33.20%), Postives = 109/253 (43.08%), Query Frame = 1 Query: 4 KFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMHIVGMXXXXXXXXXXXXXXXXXCEGHVKEAXXXXXXXXXXXXXXXFSDGDEESGV-RHVVVSQVLEXXXXXXXXXXXXXXXXXXXPCTIRPLIAALSFHQFFEG 759 K AI S+L +G++GV PL+GK LK + + F TKAFAAGVILATGF+H+L G E L +PCL W +FPF GF AMVA++LTL +D T Y+ + T G E+ D+G GGG +G+ GH G+ + + R VV+QVLE P T + L AAL FHQ FEG Sbjct: 49 KIAAIPSVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPCLKGEAW-EFPFTGFIAMVAAILTLSVDSFATSYFHKAHFKTSKRIGDG------EEQDAG-----------------GGGGGGDELGL--------------HVHAHGHT-------------HGIVGVESGESQVQLHRTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEG 250
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.295e-22 Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 1 LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGL 321 LK +AI ILI+ ++GV PL ++ FL+ DG++F K FA+G+IL TGF+H+L E L + CL E PW KFPF GF AM++ L+TL +D + T Y K + Sbjct: 43 LKVIAIFVILIASMIGVGAPLFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAV 149
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20 Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 4 KFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQ--YYERKQGLTRATEEQGRVRSVDED 369 K AI ++LI+GI+GV PL+GK L+ + F TKAFAAGVILATGF+H+L E L++PCL W +FPF GF AM+A++LTL +D T Y + R ++ + SVD + Sbjct: 54 KIAAIPTVLIAGIIGVLFPLLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCLTSEAW-EFPFTGFIAMIAAILTLSVDTFATSSFYKSHCKASKRVSDGETGESSVDSE 176
BLAST of CN186372 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 4 KFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCL-PEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQ 315 K +A SILI+G+ GV +P+ G LKT+ + F+ KAFAAGVILATGFVH+L +E+L + CL E PW FP G AM AS+LT+L++ + Y R + Sbjct: 50 KIIAFFSILIAGVFGVCLPIFG-----LKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCLGEEPPWGDFPMTGLVAMAASILTMLIESFASGYLNRSR 149 The following BLAST results are available for this feature:
BLAST of CN186372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186372 ID=CN186372; Name=CN186372; organism=Citrus sinensis; type=EST; length=767bpback to top |