CN186340

Overview
NameCN186340
Unique NameCN186340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:210..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 330.487 bits (846), Expect = 5.216e-90
Identity = 158/208 (75.96%), Postives = 174/208 (83.65%), Query Frame = 1
Query:   67 DAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            DAEKL  LKSAVAGLNQISENEK+GFINLV RYLSGEAQH++WSKIQTPTDE+VVPYD LAP+ EDPAE                    MGCTGPKSVIEVRNGLTFLDLIV QIE LNAK+GC+VPLLLMNSFNTHDDT KI+EKY+ SN++IHTFNQSQYPRL  +DF PLPCKG + KDGWYPPGHGDVFPSLMNSGKLDAL+++
Sbjct:   11 DAEKLNNLKSAVAGLNQISENEKSGFINLVGRYLSGEAQHIDWSKIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVKQIEALNAKFGCSVPLLLMNSFNTHDDTLKIVEKYANSNIDIHTFNQSQYPRLVTEDFAPLPCKGNSGKDGWYPPGHGDVFPSLMNSGKLDALLAK 218          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.285e-88
Identity = 158/210 (75.24%), Postives = 173/210 (82.38%), Query Frame = 1
Query:   61 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            AT  ++L+ LKS+VAGLNQISENEK+GFINLVARYLSGEAQHVEWSKIQTPTDE+VVPYD+LAP P+   E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN+KYG NVPLLLMNSFNTHDDT  I+EKY  SN+EIHTFNQSQYPRL  DDF+PLP KG+TDKDGWYPPGHG +FPSL NSGKLDALISQ
Sbjct:    4 ATATDRLSNLKSSVAGLNQISENEKSGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQTIVEKYQNSNIEIHTFNQSQYPRLVVDDFLPLPSKGRTDKDGWYPPGHGSMFPSLSNSGKLDALISQ 213          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.420e-87
Identity = 157/210 (74.76%), Postives = 173/210 (82.38%), Query Frame = 1
Query:   61 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            AT  EKL QLKSAV GL ++SENEK+GFINLV+RYLSGEAQH+EWSKIQTPTDEIVVPYD +A V ED +E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KY C VPL+LMNSFNTHDDT KI+EKY+KSNV+IHTFNQS+YPR+ AD+FVP P KGKTDKDGWYPPGHGDVFPSLMNSGKLDA +SQ
Sbjct:    3 ATATEKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYNCKVPLVLMNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPGHGDVFPSLMNSGKLDAFLSQ 212          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 6.598e-85
Identity = 156/203 (76.85%), Postives = 166/203 (81.77%), Query Frame = 1
Query:   85 QLKSAVAGLNQISENEKNGFINLVARYLSGE-AQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            +LKS VA L+QISENEKNGFINLV+RY+SGE AQHVEWSKIQTPTDE+VVPYD LAP PEDP E                    MGCTGPKSVIEVRNGLTFLDLIVIQIENLN KYG  VPLLLMNSFNTHDDT KI+EKYSKSNV+IHTFNQSQYPRL  +DF PLP KG+T KDGWYPPGHGDVFPSL NSGKLD L+SQ
Sbjct:   11 KLKSDVASLSQISENEKNGFINLVSRYVSGEEAQHVEWSKIQTPTDEVVVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLMNSFNTHDDTQKIVEKYSKSNVQIHTFNQSQYPRLVVEDFSPLPSKGQTGKDGWYPPGHGDVFPSLKNSGKLDLLLSQ 213          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.125e-84
Identity = 150/211 (71.09%), Postives = 171/211 (81.04%), Query Frame = 1
Query:   58 MATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            MA   E L QLKSAV GL ++SE+EK+GFI+LV+RYLSGEAQH+EWSKIQTPTDEIVVPY+ + PV +D AE                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KYGC VPL+LMNSFNTHDDT KI+EKY+ SNV+IHTFNQS+YPR+ AD+FVP P KGKTDK+GWYPPGHGDVFP+LMNSGKLD  +SQ
Sbjct:    1 MAATTENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQ 211          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.276e-84
Identity = 150/205 (73.17%), Postives = 167/205 (81.46%), Query Frame = 1
Query:   76 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            K+ +L+SAVA LNQISENEK+GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+L+P PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGCNVPLLLMNSFNTHDDT KI+EKY+ SN+EIHTFNQSQYPRL  +DF PLP KG   KDGWYPPGHGDVFPSLMNSGKLDAL+SQ
Sbjct:    5 KIAKLQSAVAELNQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDDTQKIVEKYANSNIEIHTFNQSQYPRLVMEDFQPLPSKGHAGKDGWYPPGHGDVFPSLMNSGKLDALLSQ 209          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.165e-81
Identity = 146/205 (71.22%), Postives = 164/205 (80.00%), Query Frame = 1
Query:   76 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            K+  L+ AVA L +ISENEK GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+LAP PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGC+VPLLLMNSFNTHDDT KI+EKYS SN+EIHTFNQSQYPR+  +DF+PLP KG+T KDGWYPPGHGDVFPSL NSGKLD L+SQ
Sbjct:   11 KIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGQTGKDGWYPPGHGDVFPSLNNSGKLDTLLSQ 215          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.539e-41
Identity = 90/191 (47.12%), Postives = 119/191 (62.30%), Query Frame = 1
Query:  124 ENEKNGFINLVARYLSGEAQH--VEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            ENE + F  L  RYL  ++    +EW KI++P  + VV Y+ ++  PE+ +                     MGC GPKSVIEVR G TFLDL V QIE LN +Y  +VPLLLMNSFNT  DT  +I+KYS + + I +FNQS++PR+  D  +P+P +  +  D WYPPGHGD+F SL  SG+LDALI+Q
Sbjct:   49 ENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTS----MGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQ 235          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.637e-41
Identity = 92/229 (40.17%), Postives = 128/229 (55.90%), Query Frame = 1
Query:   34 PRLDRINHMATDAEKLTQLKSAVAGLNQISENE--KNGFIN--------LVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            P+L      ++D          +  ++Q + NE  KN F+N        L  R+L    + ++W KI  P  ++V+ Y  L  + E                        MGCTGPKSVIEVR+  TFLDL V QI+ +N +Y   VPL+LMNSFNTH +T KII+KY  S+V+IH+FNQS++PR+  D+ +P+P K       WYPPGHGDVF +L NSG L+ LI++
Sbjct:   14 PQLQAFGSRSSDLATEDLFLKKLEAISQTAPNETVKNEFLNKEIPSINKLFTRFLKNRKKVIDWDKINPPPADMVLNYKDLPAITEQRTSELASKLAVLKLNGGLGTT--MGCTGPKSVIEVRSEKTFLDLSVQQIKEMNERYNIKVPLVLMNSFNTHQETGKIIQKYKYSDVKIHSFNQSRFPRILKDNLMPVPDKLFGSDSEWYPPGHGDVFFALQNSGLLETLINE 240          
BLAST of CN186340 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39
Identity = 88/218 (40.37%), Postives = 126/218 (57.80%), Query Frame = 1
Query:   43 DRINHMATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQ--HVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQ 690
            + +NH+A+  +     K+         + E + F +L +RYL  +A+   + W  +++P  E VV YD++    E                        MGC GPKS+IEVR+G +FLDL V QIE+LN KY  NVP +LMNSFNT + T+K+I+KY    ++I TFNQS+YPR+  +  +P+P    +  D WYPPGHGDVF +L NSG +D LI+Q
Sbjct:   35 NELNHLASTVKDPLAKKAF--------QKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTIT---EAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKYEAHKIDILTFNQSRYPRVHKETLLPVPHTADSAIDEWYPPGHGDVFEALTNSGIIDTLIAQ 241          
The following BLAST results are available for this feature:
BLAST of CN186340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_SOLTU5.216e-9075.96UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN1.285e-8875.24UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA1_ARATH1.420e-8774.76UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA_PYRPY6.598e-8576.85UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA2_ARATH1.125e-8471.09Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_MUSAC4.276e-8473.17UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HORVU1.165e-8171.22UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA1_YEAST1.539e-4147.12UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA2_DICDI7.637e-4140.17UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_SCHPO1.881e-3940.37Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002L24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186340 ID=CN186340; Name=CN186340; organism=Citrus sinensis; type=EST; length=692bp
GCAGTATAACGTCTGTTCTTCTAGATTCATCTTCCTCGTTTAGACCGAAT
CAATCACATGGCCACTGACGCCGAGAAGCTCACTCAGCTCAAATCTGCCG
TTGCTGGCCTCAATCAAATCAGTGAAAATGAGAAAAATGGATTCATCAAC
CTCGTTGCTCGCTATCTAAGCGGCGAAGCGCAACACGTGGAATGGAGCAA
AATCCAAACGCCTACTGATGAAATCGTAGTTCCTTATGACAGCTTGGCAC
CAGTTCCTGAAGATCCAGCGGAAACCAAAAAGCTTTTGGATAAGCTTGTC
GTGTTGAAGCTCAATGGAGGTTTGGGAACCACAATGGGCTGCACTGGTCC
CAAGTCTGTTATTGAAGTTCGTAACGGGTTGACATTTCTTGACCTCATCG
TCATCCAGATTGAGAATCTCAATGCTAAATATGGATGTAATGTTCCCCTG
CTACTCATGAACTCGTTCAACACGCATGATGATACATCGAAGATTATAGA
GAAGTACTCCAAATCAAATGTCGAGATTCATACTTTTAACCAGAGCCAGT
ATCCTCGATTGTGTGCCGATGATTTTGTGCCCTTACCATGCAAAGGGAAG
ACTGACAAGGATGGATGGTATCCTCCTGGCCACGGTGATGTCTTCCCATC
CTTAATGAACAGCGGCAAGCTTGACGCTTTAATTTCTCAGGG
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