CN186263

Overview
NameCN186263
Unique NameCN186263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8673 contig Csv1_Contig8673:5..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_ARATH (Cell division cycle 5-like protein OS=Arabidopsis thaliana GN=CDC5 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.906e-46
Identity = 90/156 (57.69%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    7 YLRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELER 474
            +L V+MGHEN++LDDFVEAHNTC+NDLMYFPTR+AY LSSVAGN +K+AA Q E E V+K+M++D++KA  ++   K YT+G+E+RAE +  QI +T+KQ E  GTE+ECF AL++QE++AAS R   L E+V KQKE E  LQ RYG++   +E+
Sbjct:  643 FLCVSMGHENKTLDDFVEAHNTCVNDLMYFPTRSAYELSSVAGNADKVAAFQEEMENVRKKMEEDEKKAEHMKAKYKTYTKGHERRAETVWTQIEATLKQAEIGGTEVECFKALKRQEEMAASFRKKNLQEEVIKQKETESKLQTRYGNMLAMVEK 798          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_MOUSE (Cell division cycle 5-related protein OS=Mus musculus GN=Cdc5l PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19
Identity = 50/156 (32.05%), Postives = 86/156 (55.13%), Query Frame = 1
Query:   10 LRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELERI 477
            ++  M H   S + + +    C + ++Y P ++ Y  +++A   +++ +L+   EI +  M  + ++A ++EK +K+   GY+ RA  L  Q++    Q+E A  EL  F  L+K E  A   R+  L EDVQ+Q+E E+ LQQRY DL  E E +
Sbjct:  643 VKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQQRYADLLMEKETL 798          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_RAT (Cell division cycle 5-related protein OS=Rattus norvegicus GN=Cdc5l PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 50/156 (32.05%), Postives = 86/156 (55.13%), Query Frame = 1
Query:   10 LRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELERI 477
            ++  M H   S + + +    C + ++Y P ++ Y  +++A   +++ +L+   EI +  M  + ++A ++EK +K+   GY+ RA  L  Q++    Q+E A  EL  F  L+K E  A   R+  L EDVQ+Q+E E+ LQQRY DL  E E +
Sbjct:  643 VKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLLKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQQRYADLLMEKETL 798          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_NEMVE (Cell division cycle 5-related protein OS=Nematostella vectensis GN=cdc5l PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 47/157 (29.94%), Postives = 88/157 (56.05%), Query Frame = 1
Query:    7 YLRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELERI 477
            +++  M H +  L+ + +    C   +++ P++  Y  +++A   ++L +L+   E+ + +M +D +KA ++EK +KV   GY+ RA  L  Q+    +Q+E +  E+  F AL+ QE  A   R+  L EDVQ+Q E E+ LQ +Y +L  E + +
Sbjct:  643 FVKSKMAHSDLPLEAYSKVWEECYAQVLFLPSQQRYTRAAMASKKDRLESLEKRLELNRYQMTEDAKKAAKIEKKLKVLLGGYQTRAVGLTKQLSDLHEQLEQSQVEMTTFQALRNQELQAIPKRLEALKEDVQRQTEREKQLQAQYSELLYERDSL 799          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_HUMAN (Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   10 LRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELERI 477
            ++  M H   S + + +    C + ++Y P ++ Y  +++A   +++ +L+   EI +  M  + ++A ++EK +K+   GY+ RA  L  Q++    Q+E A  EL  F  L+K E  A   R+  L EDVQ+Q+E E+ LQ RY DL  E E +
Sbjct:  643 VKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETL 798          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_BOVIN (Cell division cycle 5-like protein OS=Bos taurus GN=CDC5L PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   10 LRVAMGHENESLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTELERI 477
            ++  M H   S + + +    C + ++Y P ++ Y  +++A   +++ +L+   EI +  M  + ++A ++EK +K+   GY+ RA  L  Q++    Q+E A  EL  F  L+K E  A   R+  L EDVQ+Q+E E+ LQ RY DL  E E +
Sbjct:  643 VKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYADLLLEKETL 798          
BLAST of CN186263 vs. ExPASy Swiss-Prot
Match: CDC5L_DICDI (Cell division cycle 5-related protein OS=Dictyostelium discoideum GN=cdc5l PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 1
Query:   40 SLDDFVEAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVKVYTQGYEKRAENLRDQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQKELERTLQQRYGDLSTE 465
            S ++ +E  +   +  +Y P  N +   S A   + +  LQ E++    ++ +   K++ LEK + +Y  GY+ R+  +   I     Q+E +  E +CF+AL+  E +    R+  +   V  Q E+E  LQQ+Y  L  E
Sbjct:  648 SSNEILEEIDQIRSQFIYLPKENQFIEKSNANQTQLIENLQFEYDKTLNKIKNSSMKSVNLEKKLNIYNGGYQNRSNTIIKNIDDMFDQLEQSEIEYQCFVALKNNESIQMEKRLKSIENQVYDQCEIESRLQQKYAQLLNE 789          
The following BLAST results are available for this feature:
BLAST of CN186263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CDC5L_ARATH2.906e-4657.69Cell division cycle 5-like protein OS=Arabidopsis ... [more]
CDC5L_MOUSE3.955e-1932.05Cell division cycle 5-related protein OS=Mus muscu... [more]
CDC5L_RAT5.166e-1932.05Cell division cycle 5-related protein OS=Rattus no... [more]
CDC5L_NEMVE1.963e-1829.94Cell division cycle 5-related protein OS=Nematoste... [more]
CDC5L_HUMAN2.564e-1831.41Cell division cycle 5-like protein OS=Homo sapiens... [more]
CDC5L_BOVIN3.348e-1831.41Cell division cycle 5-like protein OS=Bos taurus G... [more]
CDC5L_DICDI1.609e-1226.76Cell division cycle 5-related protein OS=Dictyoste... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002K02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186263 ID=CN186263; Name=CN186263; organism=Citrus sinensis; type=EST; length=721bp
GCAGTATATCTTCGTGTAGCAATGGGGCACGAAAATGAATCCCTTGATGA
TTTTGTGGAAGCACACAATACTTGTCTGAATGATCTCATGTACTTCCCTA
CCCGTAATGCTTATGGTCTTTCAAGTGTCGCTGGAAACATGGAAAAACTT
GCAGCCTTGCAAGGTGAATTTGAGATTGTGAAAAAGAGAATGGATGATGA
TAAGGAGAAGGCTTTACAACTTGAGAAAACGGTCAAAGTTTACACACAAG
GTTATGAGAAACGAGCTGAAAACCTGCGGGATCAAATTCACTCAACTGTC
AAGCAGATGGAAACAGCTGGAACAGAGCTGGAGTGCTTCCTGGCTTTGCA
GAAGCAAGAACAATTAGCAGCATCGAGCCGAATAAATGGTCTGTGGGAGG
ATGTTCAGAAGCAAAAGGAGCTTGAGCGAACATTACAGCAGCGCTATGGA
GATCTCTCCACTGAGCTGGAAAGAATAAGCTGTCTCATAGCTGAAAGAAG
AGAACAGGCACAAAAAGCTGCTGAAGAAAAGCGTGCTCTTGAATTGGCTG
AGGCTCAAGCCAAAGCAAATCAAGCTGCTGAGCAAGTTTCAGAAGCTTCC
GAGTCTTTACCCTCAGAGGAACTTGGGAGTTCAATGGCAGTGGATCCACC
TTGTGATGAAACTACAGGCCAACAAATAAATACTGCCCACATGGATATTG
ATTCAGGGAAAGAACATACAG
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