CN186257

Overview
NameCN186257
Unique NameCN186257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1585..2297. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.148e-82
Identity = 150/180 (83.33%), Postives = 165/180 (91.67%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEILVDGPHDI++CA V+E VLAACYKALN+ HVLLEGTLLKPNMVTPG +A KV+PEVIAE+TVR LQRT+PAAVPA+VF SGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKAN EATLGTYKGDA LGEGA+ES HVKD KY
Sbjct:  179 VPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.336e-79
Identity = 147/180 (81.67%), Postives = 162/180 (90.00%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVE EILVDG HDI+KCA +TERVLAA YKAL+D HVLLEGTLLKPNMVTPG ++PKV PEV+AEHTVRALQRT+PAAVPAVVF SGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KAN EATLGTYKG++QLGEGA+ES HVKD KY
Sbjct:  180 VPIVELEILVDGSHDIHKCAAITERVLAATYKALSDHHVLLEGTLLKPNMVTPGSDSPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.059e-77
Identity = 146/180 (81.11%), Postives = 158/180 (87.78%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEILVDGPHDI++CA VTE VLAACYKALN+ HVLLEGTLLKPNMVTPG ++ KVTPEVIAE+TVR LQRT+PAAVPAV+F SGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKAN EATLGTYKGDA       ES HVKD KY
Sbjct:  179 VPIVEPEILVDGPHDIDRCAYVTETVLAACYKALNEHHVLLEGTLLKPNMVTPGSDSKKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.059e-77
Identity = 145/180 (80.56%), Postives = 157/180 (87.22%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEILVDG HDI KCA +TERVLAA YKAL+D HV+LEGTLLKPNMVTPG +APKV PEVIAEHTVRALQRT+PAAVPAVVF SGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KAN EATLGTYKG + LG GA+ES HVKD KY
Sbjct:  180 VPIVEPEILVDGSHDILKCAAITERVLAATYKALSDHHVILEGTLLKPNMVTPGSDAPKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.556e-73
Identity = 139/180 (77.22%), Postives = 154/180 (85.56%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEILVDG HDI++CA+V+ERVLAACYKALND HVLLEGT LKPN+VTPG E+ KVTPEVIAE+TVR LQRT+P AVP V+F SGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K N EATLG Y+G A  G  A+ES HVKD KY
Sbjct:  179 VPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESKKVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.068e-69
Identity = 133/180 (73.89%), Postives = 147/180 (81.67%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            V  VEPEIL DG HDI KCA VTE VLAACYKALND HVLLEGTLLKPNMVTPG ++PKV+PEVI E+TV AL+RT+PAAVP +VF SGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKAN EATLG Y G +  G  A+ES HVKD KY
Sbjct:  179 VLFVEPEILTDGSHDIAKCAAVTETVLAACYKALNDQHVLLEGTLLKPNMVTPGSDSPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.955e-61
Identity = 120/180 (66.67%), Postives = 138/180 (76.67%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPE+L  G HDI KCA VTE VLAA +KALN  HVLLEGTLLKPNMVTPG ++PKV PE+IAE+TV AL+RT+P A+P +VF SG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+  V   +Y
Sbjct:  179 VPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALNYHHVLLEGTLLKPNMVTPGSDSPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.007e-51
Identity = 104/181 (57.46%), Postives = 128/181 (70.72%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+D HV LEGTLLKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V F SGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+S ++ +  Y
Sbjct:  184 VPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 104/181 (57.46%), Postives = 127/181 (70.17%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+D HV LEGTLLKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V F SGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+S ++ +  Y
Sbjct:  184 VPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN186257 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.929e-51
Identity = 104/181 (57.46%), Postives = 127/181 (70.17%), Query Frame = -3
Query:  170 VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDPHVLLEGTLLKPNMVTPGFEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFFSGGQSEEEATPNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANFEATLGTYKGDAQLGEGAAESFHVKDSKY 709
            VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+D HV LEGTLLKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V F SGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+S ++ +  Y
Sbjct:  184 VPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of CN186257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ7.148e-8283.33Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR4.336e-7981.67Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE4.059e-7781.11Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA4.059e-7780.56Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL3.556e-7377.22Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA4.068e-6973.89Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH6.955e-6166.67Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_PANTR1.007e-5157.46Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOC_MACFA2.243e-5157.46Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN2.929e-5157.46Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002J22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186257 ID=CN186257; Name=CN186257; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTCCCATACCGAAGTTCCCAAGCTTTTTTATTGCT
CCACCTAATACGAAAAAGCCCTAAAACTATGAATGAGAATGGGCCAACCT
AATGTTCATACCGCCTTTTACTCTCATAAAGTTCATAAAGCACAACACCC
AAAGCTTCAACTGTGCTTAGTATTTGGAGTCCTTGACATGGAAAGACTCT
GCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAGGGTAGC
CTCAAAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCA
CATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCA
CGTCCAAAGGAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTT
CATGGCATTAAGGTTGGGGGTAGCCTCCTCCTCACTCTGCCCACCAGAAA
AGAACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCCGG
ACAGTGTGTTCAGCAATCACCTCCGGTGTAACTTTGGGAGCTTCAAATCC
AGGGGTCACCATGTTGGGCTTCAAAAGGGTACCCTCAAGAAGGACATGGG
GGTCATTCAAAGCCTTGTAGCATGCAGCAAGAACACGCTCGGTCACATCA
GCACACTTGTTGATGTCATGGGGACCGTCAACAAGGATCTCAGGTTCAAC
AATGGGAACAGGCC
back to top