CN186253

Overview
NameCN186253
Unique NameCN186253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5732 contig Csv1_Contig5732:2..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN186253 vs. ExPASy Swiss-Prot
Match: ZDHC8_ARATH (Probable S-acyltransferase At3g22180 OS=Arabidopsis thaliana GN=At3g22180 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 1 
Query:  178 MVRKHGWQLPAHTFQVVAITVFCLLVVAFYAFFAPFLGGHIWEYALFATYSPV 336
            MVRKHGWQLPAHT QV+AITVFCLLVVAFYAFFAPF+GG IWEY L   YSPV
Sbjct:    1 MVRKHGWQLPAHTLQVIAITVFCLLVVAFYAFFAPFVGGRIWEYVLIGVYSPV 53
[Close]
BLAST of CN186253 vs. ExPASy Swiss-Prot
Match: ZDH17_ARATH (Probable S-acyltransferase At4g15080 OS=Arabidopsis thaliana GN=At4g15080 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 1 
Query:  178 MVRKHGWQLPAHTFQVVAITVFCLLVVAFYAFFAPFLGGHIWEYALFATYSPV 336
            MVRKHGWQLPAH FQVVAITVFCLL VA+YAFFAPF+GG IWEY L   YSPV
Sbjct:    1 MVRKHGWQLPAHKFQVVAITVFCLLSVAYYAFFAPFVGGRIWEYILLGVYSPV 53
[Close]
BLAST of CN186253 vs. ExPASy Swiss-Prot
Match: ZDHC3_ARATH (Probable S-acyltransferase At2g33640 OS=Arabidopsis thaliana GN=At2g33640 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 1 
Query:  178 MVRKHGWQLPAHTFQVVAITVFCLLVVAFYAFFAPFLGGHIWEYALFATYSPVVCEFPLNYYFNMFKIIIVYL 396
            M R+HGWQLPAHTFQVVAITVF LL VA+YAFFAPFLG  ++EY     YS           F  F ++++Y+
Sbjct:    1 MARRHGWQLPAHTFQVVAITVFFLLTVAYYAFFAPFLGNKLYEYIAIGVYS-----------FLAFSVLVLYI 62
The following BLAST results are available for this feature:
BLAST of CN186253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZDHC8_ARATH3.172e-2184.91Probable S-acyltransferase At3g22180 OS=Arabidopsi... [more]
ZDH17_ARATH3.507e-2083.02Probable S-acyltransferase At4g15080 OS=Arabidopsi... [more]
ZDHC3_ARATH6.844e-1654.79Probable S-acyltransferase At2g33640 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J19_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186253 ID=CN186253; Name=CN186253; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTCAATCTTTATTATGTGTTTATCATTTTTGCTTTTTTTGCTTTA
CAGGGGGAAGTGCCGAACTGGGAAGTGGGAACTTCAATTTACTGTGTCTC
TTTCTGTCTGTCTCTTCTAGGTTCACTGTGTGTGTTAGGGTTTCTGTGGG
TTTTAAGGTGGGAGAATTTTGACAGTTATGGTGAGAAAACATGGATGGCA
ACTACCTGCACACACGTTTCAGGTTGTTGCAATTACTGTATTTTGCTTGT
TAGTAGTCGCATTCTATGCTTTCTTCGCTCCTTTCCTTGGAGGCCACATC
TGGGAATATGCTTTGTTTGCTACTTATTCACCAGTGGTATGTGAGTTCCC
TTTAAATTACTATTTTAATATGTTCAAGATTATTATTGTATACTTGTGAA
ATGGCATAAAAGTTGCACCAGTCGCAAGTCTCAAACCAGAGCAACACCGG
GAGGTTTCTGGATTATCAAACAGAAAAATCAAAAAGATCAATGTCTACTG
TGTAAACTTAAAATGAGGATTGGTAGTTGGGACTGTTCATTCCATGTATG
ACAACAAGGTTCTATTCTTATTAAGGCATCCTCTCTGAGGAATCTATTGA
GACTACAGTAAAACCCTAATCTCTTCCTCGGAGATCGGCCATGGCTTCCT
CTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAGCC
GAGCGCTAC
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