CN186242

Overview
NameCN186242
Unique NameCN186242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length405
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN186242 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.431e-11
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = -1 
Query:  250 QCLKKGSSYVADFVETDLSFFSPVVLMDVQAAETEGNCKWGPPWVCVNCTCG 405
            QC+KKGSSY AD +ET+ S  +  V+MD  AAE +G CK GP   C NCTCG
Sbjct:   15 QCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of CN186242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA4.431e-1157.69Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002J14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002J14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186242 ID=CN186242; Name=CN186242; organism=Citrus sinensis; type=EST; length=405bp
CCCAAAAGGGCACGGNCATGGCCATGGCCCCTTTTAAGGTGATTATGAAA
AAGGAAACCCAAAACATTTCCAGTGATGGGGGACACAACACCCACATCAC
TCCCCACACTAGTAGTAAACCCTCTTAAAAACCAAGTAAAGAATTTTTCT
TTTTTTTTAAACCCCCTTACATTATTCTTAACCCCCACAATATTTAGGCC
CCCTTGCCCCTTCTTATTTTTTGCTGCATGGGTTTGCTTATTAGTGACTA
CCACAAGTGCAGTTCACACAAACCCAGGGGGGGCCCCACTTGCAGTTACC
TTCAGTCTCAGCAGCCTGAACGTCCATTAAAACAACGGGGCTGAAAAAAC
TCAAGTCAGTCTCCACAAAATCAGCAACATAACTGCTTCCCTTTTTCAAA
CACTG
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