CN186237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.499e-21 Identity = 67/168 (39.88%), Postives = 88/168 (52.38%), Query Frame = -3 Query: 332 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTN----SSYQ----------MGGGSGEEDEDTPTGHRANALLPAWMLRHLH 793 WTLE++KLKAR+EVLQRNQKH++GEDL L++KELQ++E Q+DS LK IRSRKNQLM +SIS ++ NH+ NSS L Q L + +YQ GG S ++ G N ++P WMLRHL+ Sbjct: 91 WTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQ----NHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQ-----GAANNTVMPQWMLRHLN 249
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.657e-19 Identity = 46/62 (74.19%), Postives = 55/62 (88.71%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 WTLE+ KLKAR+EVLQRNQKH++GEDL LS+KELQ++E Q+DS LK IRSRKNQLM +SIS Sbjct: 91 WTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESIS 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.784e-18 Identity = 64/156 (41.03%), Postives = 82/156 (52.56%), Query Frame = -3 Query: 341 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTNSS-----YQMGGGSGEEDEDTPTGHRANALLPAWMLR 793 W LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+D+ +K IRSRKNQ M +SIS QL NSS+V L Q SS ++GG +G T N+LLPAWMLR Sbjct: 91 WVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESIS------ALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLPQYCVTSSRDGFVERVGGENGGASSLT----EPNSLLPAWMLR 236
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.338e-17 Identity = 59/163 (36.20%), Postives = 81/163 (49.69%), Query Frame = -3 Query: 332 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSS---------NVHLMQTLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLRHLH 793 WTLE +KLKAR+EVLQRN+K ++GEDL L++KELQ++E Q+ S LK IRSRKNQLM +SIS + NH+ NSS + HL + N++ G + G N ++P WM+RHL+ Sbjct: 91 WTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQ----NHEINSSTFVLPQQLDSPHLGEASQNTNVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLN 249
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.359e-17 Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = -3 Query: 341 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLR 793 W LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+ + +K IRSRKNQ M +SIS + NSS + LT+S G E+E + N+LLPAWMLR Sbjct: 91 WVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESIS-----ALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQCSNNSSILQPQYCLTSSRDGFVGRVEGENEGASSLAEPNSLLPAWMLR 236
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 38/62 (61.29%), Postives = 55/62 (88.71%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IRSRKNQLM SI+ Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSIN 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 37/62 (59.68%), Postives = 56/62 (90.32%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IR+RKNQLM +SI+ Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESIN 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16 Identity = 36/62 (58.06%), Postives = 57/62 (91.94%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W++EYS+LKA++E+L+RNQ+H++GE+L +SLK+LQ++EQQ+++ LK IRSRKNQLM +S++ Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLN 154
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 91 WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of CN186237 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.080e-15 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = -3 Query: 608 WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 793 W EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 91 WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152 The following BLAST results are available for this feature:
BLAST of CN186237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186237 ID=CN186237; Name=CN186237; organism=Citrus sinensis; type=EST; length=795bpback to top |