CN186161

Overview
NameCN186161
Unique NameCN186161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5523 contig Csv1_Contig5523:79..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_DROME (Putative oligosaccharyltransferase complex subunit CG9662 OS=Drosophila melanogaster GN=CG9662 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24
Identity = 54/141 (38.30%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFTLPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYLR 523
            P+ I+ PP ++++  S  +PSPM VF+++L +YF+V  G +YDVIVEPP +G+T D   G  RPV F+P RVNGQYI+EGL+S              D      +    ++   + G   I++++  + LF+R+K+P YL+
Sbjct:    9 PFHILVPPNIKVRRFSIPMPSPMAVFSVILFSYFLVTGGIIYDVIVEPPSLGATVD-EHGHSRPVAFMPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLLTAMGFIFILVSFFTTWLFMRMKLPSYLQ 148          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_DANRE (Oligosaccharyltransferase complex subunit ostc OS=Danio rerio GN=ostc PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 57/141 (40.43%), Postives = 88/141 (62.41%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P++++  P ++LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G  S+++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNVKLKKPSWLHMPSAMTVYAVVIVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVSVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_CHICK (Oligosaccharyltransferase complex subunit OSTC OS=Gallus gallus GN=OSTC PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P++++  P ++LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G  S+++++ M+ +F+R+K+PGYL
Sbjct:    8 PFAVLECPNIKLKRPGWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVSVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTCA_XENLA (Oligosaccharyltransferase complex subunit ostc-A OS=Xenopus laevis GN=ostc-A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_XENTR (Oligosaccharyltransferase complex subunit ostc OS=Xenopus tropicalis GN=ostc PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTCB_XENLA (Oligosaccharyltransferase complex subunit ostc-B OS=Xenopus laevis GN=ostc-B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_BOVIN (Oligosaccharyltransferase complex subunit OSTC OS=Bos taurus GN=OSTC PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23
Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSVTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_RAT (Oligosaccharyltransferase complex subunit OSTC OS=Rattus norvegicus GN=Ostc PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_MOUSE (Oligosaccharyltransferase complex subunit OSTC OS=Mus musculus GN=Ostc PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CN186161 vs. ExPASy Swiss-Prot
Match: OSTC_CANFA (Oligosaccharyltransferase complex subunit OSTC OS=Canis familiaris GN=OSTC PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  101 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXXDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 520
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S              D +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
The following BLAST results are available for this feature:
BLAST of CN186161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
OSTC_DROME6.617e-2438.30Putative oligosaccharyltransferase complex subunit... [more]
OSTC_DANRE8.643e-2440.43Oligosaccharyltransferase complex subunit ostc OS=... [more]
OSTC_CHICK8.643e-2440.43Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTCA_XENLA1.129e-2340.43Oligosaccharyltransferase complex subunit ostc-A O... [more]
OSTC_XENTR1.474e-2340.43Oligosaccharyltransferase complex subunit ostc OS=... [more]
OSTCB_XENLA1.474e-2340.43Oligosaccharyltransferase complex subunit ostc-B O... [more]
OSTC_BOVIN4.289e-2340.43Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_RAT5.602e-2340.43Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_MOUSE5.602e-2340.43Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_CANFA5.602e-2340.43Oligosaccharyltransferase complex subunit OSTC OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186161 ID=CN186161; Name=CN186161; organism=Citrus sinensis; type=EST; length=819bp
CCCAAATGGCTCGAAGCAGAAGCAGCACAAACCCTCGCATCACAATCCGA
CGCACTCTCTTTCGTCAATTGACCCACTGTTCCACATCCTCAAAATCTTC
CCTTACTCGATCATCCGCCCGCCGCGTCTCCGCCTGAAGCTGCCGTCATT
CACGCTCCCATCCCCAATGACCGTCTTCGCCCTCGTCCTCCTAACCTACT
TTATGGTCGTGTCGGGCTTCGTCTACGACGTCATCGTTGAGCCCCCTGGC
ATCGGGTCCACGCAGGACCCCGCCACCGGTTCCGTACGCCCCGTCGTCTT
CCTACCCGGCCGCGTCAACGGGCAGTACATCATCGAGGGACTCTCTTCTG
GGTTCATGTTCGTGCTCGGCGGGATGGGCTTCGTGCTTTTGGATCTCGCT
CTTGATAAGAATAGGGCTAAGAGTGTTAAGGTCTCTTATGCCTCTGCTGG
GATCTCTTCCATTGTCATTGCTTATATTATGAGTATGCTCTTTATTCGCA
TTAAGATCCCTGGTTATCTTAGGTGAATTTTTATTTTCTTTTTTAATGCT
GTTCTTTAACTTAGTTTTGATAAGAGTTTAATTGGGTTGTGGATTTTTTT
ATGGTATTTGATCAGATCGTGTTATACACTTGCAATGAATTCCAGCCATC
TCTCTTGACATTTACTTGCCCTTCATTTGCAATGGCGGATGAGGAACTTG
TTGATCAGAAGAAGTATTTTGAAGAAGCATGCAAACCAAAGTGTGTGAAA
CCGTTGCTTGAATATCAGGCATGTGTTAAGAGGATACAAGGTGATGAAAG
TGGGCACAAGCACTGCACC
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