EY665712

Overview
NameEY665712
Unique NameEY665712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665712 vs. ExPASy Swiss-Prot
Match: YLP3_PSEPU (Uncharacterized methyltransferase in lpd-3 5'region OS=Pseudomonas putida PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.553e-24
Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 2
Query:  152 GITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDRIISCEMIENVGHE----YIEEFFGCCESXXXXXXXXXXQFSSVPDQCYDGHRLSPG---FITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNFMEKQSEILALGXHEKFIRTWEYYFDYCAAGIKSPTLRNYQNVFFRP 727
            GITLS+EQLK    +VK  GL D + L + DYR +P+  ++D+++S  M E+VGH     Y ++ FG                  +  +  DG  +  G   FI  YVFP G LP L+ I SA    + L V  +E++ +H+ +TL  W  N +E Q    A    EK +R W  Y   CA   +   +  +Q +  +P
Sbjct:  187 GITLSKEQLKLGRQRVKAEGLTDKVDLQILDYRDLPQDGRFDKVVSVGMFEHVGHANLALYCQKLFGAVREGGLVMN------HGITAKHVDGRPVGRGAGEFIDRYVFPHGELPHLSMI-SASICEAGLEVVDVESLRLHYAKTLHHWSEN-LENQLHKAAALVPEKTLRIWRLYLAGCAYAFEKGWINLHQILAVKP 377          

HSP 2 Score: 38.1206 bits (87), Expect = 2.553e-24
Identity = 18/35 (51.43%), Postives = 22/35 (62.86%), Query Frame = 1
Query:   13 LDVAQMRKVSLLIEKARVNKGLDVLEIGCGWGTLA 117
            LD AQ  K   L  K R+N G  +L++GCGWG LA
Sbjct:  140 LDQAQQDKFDHLCRKLRLNAGDYLLDVGCGWGGLA 174          
BLAST of EY665712 vs. ExPASy Swiss-Prot
Match: CFA_ECOLI (Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) GN=cfa PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 65/226 (28.76%), Postives = 102/226 (45.13%), Query Frame = 2
Query:   56 KQELIRGLMFLRLDVGGEPXXXXXXXXXDVST-GITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDRIISCEMIENVGHEYIEEFFGCCESXXXXXXXXXXQF--SSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNFMEKQSEILALGXHEKFIRTWEYYFDYCAAGIKSPTLRNYQNVFFR 724
            K +L  G+  L +  G            DVS  G+T+S EQ K  + + +  GL   + + L DYR + +  ++DRI+S  M E+VG +  + +F   +               S   D   D       +I +Y+FP GCLPS+ +I  A +S     +E   N G  +  TL  W   F+    EI A    E+F R + YY + CA   ++  ++ +Q VF R
Sbjct:  162 KLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCE--GLD--VTILLQDYRDLND--QFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDP------WINKYIFPNGCLPSVRQI--AQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEI-ADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 372          
BLAST of EY665712 vs. ExPASy Swiss-Prot
Match: CFA_ECOL6 (Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6 GN=cfa PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 65/226 (28.76%), Postives = 102/226 (45.13%), Query Frame = 2
Query:   56 KQELIRGLMFLRLDVGGEPXXXXXXXXXDVST-GITLSEEQLKYTETKVKEAGLQDHIRLYLCDYRQMPEVKKYDRIISCEMIENVGHEYIEEFFGCCESXXXXXXXXXXQF--SSVPDQCYDGHRLSPGFITEYVFPGGCLPSLNRITSAMTSSSRLCVEHLENIGIHFYQTLRCWRTNFMEKQSEILALGXHEKFIRTWEYYFDYCAAGIKSPTLRNYQNVFFR 724
            K +L  G+  L +  G            DVS  G+T+S EQ K  + + +  GL   + + L DYR + +  ++DRI+S  M E+VG +  + +F   +               S   D   D       +I +Y+FP GCLPS+ +I  A +S     +E   N G  +  TL  W   F+    EI A    E+F R + YY + CA   ++  ++ +Q VF R
Sbjct:  162 KLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCE--GLD--VTILLQDYRDLND--QFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDP------WINKYIFPNGCLPSVRQI--AQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEI-ADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 372          
The following BLAST results are available for this feature:
BLAST of EY665712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YLP3_PSEPU2.553e-2432.66Uncharacterized methyltransferase in lpd-3 5'regio... [more]
CFA_ECOLI1.474e-1328.76Cyclopropane-fatty-acyl-phospholipid synthase OS=E... [more]
CFA_ECOL61.474e-1328.76Cyclopropane-fatty-acyl-phospholipid synthase OS=E... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665712 ID=EY665712; Name=EY665712; organism=Citrus sinensis; type=EST; length=853bp
GAATATGAAGACTTGGATGTTGCACAAATGAGAAAAGTTTCTCTTCTGAT
TGAGAAAGCAAGAGTTAATAAGGGGCTTGATGTTCTTGAGATTGGATGTG
GGTGGGGAACCTTAGCTATTGAAATAGTCAAGCAAACTGGATGTAAGTAC
AGGCATAACCTTGTCTGAGGAGCAACTGAAATATACAGAAACAAAAGTGA
AGGAAGCTGGCCTTCAGGACCACATCAGATTGTATCTTTGTGATTATCGT
CAAATGCCTGAAGTGAAAAAATATGACAGAATTATTTCTTGCGAGATGAT
AGAAAATGTTGGTCATGAATACATCGAGGAGTTTTTTGGTTGCTGCGAAT
CTCTACTGGCTGAACATGGACTTCTTCTTCTACAGTTCTCATCAGTACCG
GATCAGTGTTATGATGGGCACAGGCTAAGTCCTGGTTTTATAACAGAATA
TGTTTTCCCTGGAGGATGCTTGCCATCGTTAAATAGAATAACATCGGCCA
TGACTTCTTCATCCAGATTATGTGTGGAGCATCTGGAAAATATAGGAATT
CATTTCTACCAAACACTTAGATGTTGGAGAACAAACTTTATGGAAAAACA
GAGTGAAATTCTTGCTCTGGGATTNCACGAAAAGTTCATTCGGACATGGG
AGTATTATTTTGATTATTGTGCTGCCGGAATCAAGTCTCCTACACTCCGA
AATTATCAGAATGTATTTTTCCGTCCCAACATCGTTGCTGCTTTTCACAA
ATCCCCCGAAAAGCTTTCCTTCACCATAGCAATGCTGCGGGATTTAAATT
TTATATTAAATAAAATATTTGGTAATAAGAAAAATTTAAAGGTACTTTTC
TTT
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