EY665702

Overview
NameEY665702
Unique NameEY665702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.629e-66
Identity = 109/140 (77.86%), Postives = 118/140 (84.29%), Query Frame = 1
Query:   31 RPAKVAVVQASLSQKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADEQG--VSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            R +KV VV+ASL +K+HEGRRGF K LLGN   G  LL SG A ADEQG  VSSSRMSYSRFLEYL K RV+KVDL+ENGTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK R KNIDFAAHNAQED GS + NLIGN
Sbjct:   29 RTSKVTVVKASLDEKKHEGRRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIGN 168          

HSP 2 Score: 63.5438 bits (153), Expect = 2.629e-66
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  518 PVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            P GPGFPL + QSKAKF  E NTGV F      + E K+ F+E  EFL KP++F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  193 PGGPGFPLQIGQSKAKFQMEPNTGVTF-DDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARIPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 279          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.865e-65
Identity = 113/139 (81.29%), Postives = 122/139 (87.77%), Query Frame = 1
Query:   31 RPAKVAVVQASLS-QKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            R +KV VV+ASL  +K+ EGRR FLK LLGN GVG  L+ SGKA ADEQGVSSSRMSYSRFLEYL KDRV KVDL+ENGTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK R KNIDFAAHNAQED GS+LFNLIGN
Sbjct:   39 RTSKVNVVKASLDGKKKQEGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIGN 175          

HSP 2 Score: 59.6918 bits (143), Expect = 2.865e-65
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 2
Query:  518 PVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            P GPG PL   QSKAKF  E NTGV F      + E K+ F+E  EFL KP++F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  200 PGGPGNPLQFGQSKAKFQMEPNTGVTF-DDVAGVDEAKQDFMEVVEFLKKPERFTAV-GAKIPKGVLLIGPPGT-GKTLLAKAI-AGEAGV 286          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 8.286e-65
Identity = 114/149 (76.51%), Postives = 122/149 (81.88%), Query Frame = 1
Query:    1 STVGIPGRPTRPAKVAVVQASLSQKQHEGRRGFLKKLLGNVGVGT-ALLGSGKAYADEQGVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            ST+   G   RP  V    ASL  K ++ RR FLK  LGN+GVG   LLG+ +A A+EQGVSSSRMSYSRFLEYL KDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK REKNIDFAAH+ QEDSGSLLFNLIGN
Sbjct:   17 STLPSSGVAQRPVSVT---ASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQEDSGSLLFNLIGN 162          

HSP 2 Score: 62.003 bits (149), Expect = 8.286e-65
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 2
Query:  518 PVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            P GPGFPL   QS+AKF  E NTGV F      + E K+ F+E  EFL KP++F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  187 PNGPGFPLGFGQSRAKFQMEPNTGVTF-DDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARIPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 273          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.879e-32
Identity = 54/107 (50.47%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  127 VGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            +GT L    KA  +     +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE  +P +G ++QRVRV LPGL  +L+++ +EKN+DFAAH    + G+ L N +GN
Sbjct:   71 LGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVVG-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGN 176          

HSP 2 Score: 55.4546 bits (132), Expect = 3.879e-32
Identity = 39/91 (42.86%), Postives = 48/91 (52.75%), Query Frame = 2
Query:  518 PVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            P GP  P  L +SKAKF  E NTG+ F      + E K+ F E  EFL  P+KFSA   +   +GV   GPPG   KT   + I  G+ GV
Sbjct:  197 PAGPNLPFGLGRSKAKFQMEPNTGITF-EDVAGVDEAKQDFEEIVEFLKTPEKFSAL-GAKIPKGVLLTGPPGT-GKTLLAKAI-AGEAGV 283          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.880e-32
Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:   34 PAKVAVVQASLSQKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADE---QGVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            PAK+    +S S+     RR  L+     +G+G  L  +  A A+    + V+S+RMSYSRFLEYL    VKKVD FENGT+A+ E       +RV RV+VQLPGL  EL++K R+K +DFAAH  +  +G +L +L+ N
Sbjct:   35 PAKITPPSSSSSEAAGLSRRRLLQS--AGLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVN 172          

HSP 2 Score: 49.6766 bits (117), Expect = 3.880e-32
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 2
Query:  524 GPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            GP  P  L +SKAKF  E  TGV F      + E K+ F E  +FL  P+KF+A   + + +GV  +GPPG   KT   + I  G+ GV
Sbjct:  196 GPSLPFGLGKSKAKFQMEPKTGVTF-DDVAGVDEAKQDFQEIVQFLKFPEKFTAV-GARTPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 280          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.808e-28
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 1
Query:  172 QGVSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAH--NAQEDSGSLLFNLI 438
            + ++SSRM+Y RFLEYL    VKKVDL++ G  AIVEAI PELGNR+QR+RV+LP  + EL+ K R+ N+D  AH  N    + SL+ NLI
Sbjct:   36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPELITKLRKANVDLDAHATNDSTPAWSLIGNLI 126          

HSP 2 Score: 46.9802 bits (110), Expect = 8.808e-28
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 2
Query:  515 VPVGPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            +P GPG  +   +SKA+F  E  TGV F      + E K+ F E   FL KP++F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  145 LPGGPGQAMNFGKSKARFQMEAKTGVTF-NDVAGVDEAKEEFEEVVSFLKKPERFTAV-GAKIPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 232          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.714e-26
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  178 VSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDS------GSLLFNLI 438
            ++SSRM+Y RFLEYL    VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K R+ N+D  AH  +  S      G+LLF LI
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPKSTSAVWGLLGNLLFPLI 130          

HSP 2 Score: 41.5874 bits (96), Expect = 2.714e-26
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 2
Query:  524 GPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGIFVGKTGV 790
            GPG  ++  +SKA F  E  TGV F      + E K+ F E   FL +P+ F+A   +   +GV  +GPPG   KT   + I  G+ GV
Sbjct:  148 GPGQAMSFGKSKALFQMEAKTGVVF-NDVAGVEEAKEEFQEVVTFLKQPESFTAV-GAKIPKGVLLVGPPGT-GKTLLAKAI-AGEAGV 232          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.319e-25
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 1
Query:  178 VSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            ++SSRM+Y RFLEYL    VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K R+ N+D  AH  +  S S ++ L+GN
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPK--STSAVWGLLGN 124          

HSP 2 Score: 39.6614 bits (91), Expect = 1.319e-25
Identity = 30/82 (36.59%), Postives = 42/82 (51.22%), Query Frame = 2
Query:  524 GPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGI 769
            GPG  ++  +SKA F  E  TGV F      + E K+ F E   FL +P+ F+A   +   +GV  +GPPG   KT   + I
Sbjct:  148 GPGQAMSFGKSKALFQMEAKTGVVF-NDVAGVEEAKEEFQEVVTFLKQPESFTAV-GAKIPKGVLLVGPPGT-GKTLLAKAI 226          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.243e-21
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1
Query:  178 VSSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 444
            V SS+M+Y RFLEYL    V +VDL++N   AIV+A SPELGNR Q +RV++P  + +L+QK +E NIDF AH A++   ++  N++ N
Sbjct:   50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLIQKLKEYNIDFDAHPAEQK--NIFVNILSN 136          

HSP 2 Score: 35.4242 bits (80), Expect = 2.243e-21
Identity = 25/78 (32.05%), Postives = 41/78 (52.56%), Query Frame = 2
Query:  536 PLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGI 769
            P++L +S A+F +  +TGV+F      + E K  F E   FL +P K++    +   +G+  +GPPG   KT   + I
Sbjct:  165 PMSLGKSTARFERRPDTGVSF-KDIAGIDEAKTEFEEIVSFLKEPDKYTIV-GAKIPKGILLVGPPGT-GKTLLAKAI 239          
BLAST of EY665702 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.950e-18
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  181 SSSRMSYSRFLEYLVKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSG--SLLFNLI 438
            SSSRM+Y RFLEY+  + VKKVDL++N   AIV+ I+P++    Q VRV+LP  S EL+ K + K IDF AH +  +    S L NL+
Sbjct:   37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSNVNLVSWLSNLL 124          

HSP 2 Score: 31.5722 bits (70), Expect = 5.950e-18
Identity = 26/82 (31.71%), Postives = 38/82 (46.34%), Query Frame = 2
Query:  524 GPGFPLALCQSKAKFPKETNTGVNF**SFPNLMEQKKIFLERGEFL*KPKKFSAFWNSYSQRGVFSLGPPGNWEKTFFCQGI 769
            GPG      ++KA+F  E  TG+ F      + E K+   E   FL   +KF+    +   +GV  +GPPG   KT   + I
Sbjct:  146 GPGQAFNFGKAKARFHMEAKTGIVF-EDVAGIEEAKEELQEIVAFLKDSRKFTNV-GATIPKGVLLVGPPGT-GKTLLAKAI 224          
The following BLAST results are available for this feature:
BLAST of EY665702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FTSH8_ARATH2.629e-6677.86Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH2_ARATH2.865e-6581.29Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH2_ORYSJ8.286e-6576.51Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH6_ARATH3.879e-3250.47Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH6_ORYSJ3.880e-3244.29Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_GUITH8.808e-2854.95Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH_PORPU2.714e-2654.84Cell division protease ftsH homolog OS=Porphyra pu... [more]
FSTH_PORYE1.319e-2555.06Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_ODOSI2.243e-2149.44Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_CYACA5.950e-1848.86Cell division protease ftsH homolog OS=Cyanidium c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665702 ID=EY665702; Name=EY665702; organism=Citrus sinensis; type=EST; length=921bp
AGTACGGTCGGGATTCCGGGTCGACCCACGCGTCCGGCCAAAGTAGCCGT
TGTACAGGCATCTTTGAGCCAGAAGCAGCATGAAGGAAGAAGAGGGTTTC
TTAAGAAGCTGCTTGGAAATGTTGGAGTTGGTACTGCTTTGTTGGGGAGT
GGGAAAGCCTATGCCGATGAACAGGGGGTTTCTTCCTCTAGGATGTCTTA
CTCTAGGTTCTTGGAGTATCTTGTTAAGGACAGGGTGAAGAAGGTTGATT
TGTTTGAGAATGGTACCATAGCTATTGTGGAGGCTATTTCCCCTGAGTTG
GGTAACCGGGTGCAACGAGTTCGCGTTCAACTTCCAGGTCTAAGTCAGGA
GCTTCTCCAGAAATTCAGGGAGAAGAACATTGATTTTGCTGCCCATAATG
CTCAAGAGGACTCAGGATCATTGTTGTTTAACTTGATTGGGAATCTGGCT
TTCCCACTTATCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATC
TGGTGGAATGGGCGGTCCCTGTGGGGCCTGGTTTCCCCCTTGCCCTTTGT
CAGTCCAAAGCTAAATTTCCAAAGGAAACAAATACTGGTGTGAACTTTTG
ATGAAGTTTCCCGAATTTGATGGAGCAAAAAAAAATTTTCTTGGAAAGGG
GGGAATTCCTTTAAAAACCCAAAAAATTTTCAGCTTTTTGGAACTCGTAT
TCCCAAAGGGGGGTCTTTTCTCTTGGCCCCCCCGGGAATTGGGAAAAAAC
CTTTTTTTGCCAGGGAATTTTTGTGGGGAAAACCGGGGTTCCTTTTTTTT
CTCCCTTTTCGGGGTTTCAAAATTTTTTTAAAAAAATTTTTTTGTGGGTG
TCGGGGGTTTTTTTAAAAGGGCCCAAAAAATTTTTTTTCAAAAAAAGCGA
AAAAAAAAAAAAATTCTCCTT
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